RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 C2orf42Q9NWW7 574 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 RPH3AQ9Y2J0 694 aaPredicted RBP8.1□□□□□ -1.11
LINC00558-201ENST00000569422 BOLA1Q9Y3E2 137 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 SIRT4Q9Y6E7 314 aaPredicted RBP8.1□□□□□ -1.11
LINC00558-201ENST00000569422 CACNA1IQ9P0X4 2223 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 A6NL46 340 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 E9PI62 339 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 CHST10O43529 356 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 GOSR1O95249 250 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 IFNA16P05015 189 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 DBIP07108 87 aaKnown RBP8.1□□□□□ -1.11
LINC00558-201ENST00000569422 CSF3P09919 207 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 SMIM10L1P0DMW3 83 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 SDHBP21912 280 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 BMP8BP34820 402 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 INPP1P49441 399 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 SCN1BQ07699 218 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 CRYZQ08257 329 aaKnown RBP8.1□□□□□ -1.11
LINC00558-201ENST00000569422 C19orf57Q0VDD7 668 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 KRR1Q13601 381 aaKnown RBP8.1□□□□□ -1.11
LINC00558-201ENST00000569422 TPBGQ13641 420 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 PRICKLE4Q2TBC4 344 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 EIPR1Q53HC9 387 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 QSOX2Q6ZRP7 698 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 BMP8AQ7Z5Y6 402 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 OAFQ86UD1 273 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 RAB43Q86YS6 212 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 CA13Q8N1Q1 262 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 VWA5B2Q8N398 1253 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 CDRT4Q8N9R6 151 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 SCAIQ8N9R8 606 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 POGLUT1Q8NBL1 392 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 SLC37A3Q8NCC5 494 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 ITPKCQ96DU7 683 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 SMIM10Q96HG1 83 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 ZNF350Q9GZX5 532 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 GHITMQ9H3K2 345 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 TMEM27Q9HBJ8 222 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 WSB2Q9NYS7 404 aaPredicted RBP8.1□□□□□ -1.11
LINC00558-201ENST00000569422 DTX4Q9Y2E6 619 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 MED31Q9Y3C7 131 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 GRIP1Q9Y3R0 1128 aa8.1□□□□□ -1.11
LINC00558-201ENST00000569422 A0A0J9YY10 115 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 CDHR4A6H8M9 788 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 A8MUA0 341 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 PRR23D1E9PI22 279 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 PSMD9O00233 223 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 CYR61O00622 381 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 DYRK3O43781 588 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 GALR3O60755 368 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 ECDO95905 644 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 HMGN1P05114 100 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 GLAP06280 429 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 PRR23D2P0DMB1 279 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 SLC2A2P11168 524 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 HTR1FP30939 366 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 ETV6P41212 452 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 POU3F4P49335 361 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 CCR4P51679 360 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 CTBP2P56545 445 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 ADAM15Q13444 863 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 HTR4Q13639 388 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 CRMP1Q14194 572 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 SLC25A30Q5SVS4 291 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 ZNF322Q6U7Q0 402 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 ACBD7Q8N6N7 88 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 LRRC17Q8N6Y2 441 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 ZNF655Q8N720 491 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 OR4K13Q8NH42 304 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 TXNDC15Q96J42 360 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 FN3KQ9H479 309 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 MEPEQ9NQ76 525 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 MAU2Q9Y6X3 613 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 IQCMA0A1B0GVH7 501 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 CCDC182A6NF36 153 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 FAM171A2A8MVW0 826 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 HLA-DPB1P04440 258 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 PSKH1P11801 424 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 APEHP13798 732 aaKnown RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 MAOAP21397 527 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 SHC1P29353 583 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 NAA10P41227 235 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 FOXK2Q01167 660 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 SQSTM1Q13501 440 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 FAM53BQ14153 422 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 NDUFA5Q16718 116 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 ALG10BQ5I7T1 473 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 AGAP6Q5VW22 663 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 TRIQKQ629K1 86 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 SYT9Q86SS6 491 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 Q8N402 240 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 C19orf18Q8NEA5 215 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 SDR9C7Q8NEX9 313 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 OR13C5Q8NGS8 318 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 OR4C6Q8NH72 309 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 PTP4A1Q93096 173 aa8.09□□□□□ -1.11
LINC00558-201ENST00000569422 ZMYND19Q96E35 227 aaPredicted RBP8.09□□□□□ -1.11
LINC00558-201ENST00000569422 AGAP4Q96P64 663 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms