RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	TOMM34	Q15785	309 aa	Predicted RBP	10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	ALG10B	Q5I7T1	473 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	PIWIL3	Q7Z3Z3	882 aa	Known RBP	10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	RBM45	Q8IUH3	476 aa	Known RBP	10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	ADGRG5	Q8IZF4	528 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	CPT1C	Q8TCG5	803 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	ADAMTS16	Q8TE57	1224 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	C3orf49	Q96BT1	292 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	SARAF	Q96BY9	339 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	MPP4	Q96JB8	637 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	C7orf34	Q96L11	122 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	ZNF347	Q96SE7	839 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	SEPHS2	Q99611	448 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	WFDC6	Q9BQY6	131 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	AMBRA1	Q9C0C7	1298 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	ADAM19	Q9H013	955 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	DEFB127	Q9H1M4	99 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	ASF1B	Q9NVP2	202 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	RPH3A	Q9Y2J0	694 aa	Predicted RBP	10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	AP4B1	Q9Y6B7	739 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	KALRN	O60229	2985 aa		10.86	□□□□□ -0.67
FANCA-231	ENST00000568626	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	CPSF4L	A6NMK7	179 aa	Known RBP	10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	ZNF208	O43345	1280 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	TPST2	O60704	377 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	PEPD	P12955	493 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	POU3F2	P20265	443 aa	Predicted RBP	10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	CXCR1	P25024	350 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	TACR3	P29371	465 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	CLK1	P49759	484 aa	Known RBP	10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	VLDLR	P98155	873 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	RBPJ	Q06330	500 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	ST3GAL3	Q11203	375 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	BCL2A1	Q16548	175 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	ELOA3B	Q3SY89	546 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	PRR30	Q53SZ7	412 aa	Predicted RBP	10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	C5orf46	Q6UWT4	87 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	ATG4D	Q86TL0	474 aa	Predicted RBP	10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	ZDHHC21	Q8IVQ6	265 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	ZNF843	Q8N446	348 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	ELOA3	Q8NG57	546 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	POC1B	Q8TC44	478 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	DUS3L	Q96G46	650 aa	Known RBP	10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	PIP5K1A	Q99755	562 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	KLHDC3	Q9BQ90	382 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	ANKRD19P	Q9H560	264 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	CCM2L	Q9NUG4	571 aa	Predicted RBP	10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	NDUFAF4	Q9P032	175 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	CHRNA9	Q9UGM1	479 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	OSGIN1	Q9UJX0	560 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	ACAD8	Q9UKU7	415 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	A4GNT	Q9UNA3	340 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	AURKC	Q9UQB9	309 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	LIPG	Q9Y5X9	500 aa		10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	SPEN	Q96T58	3664 aa	Known RBP	10.85	□□□□□ -0.67
FANCA-231	ENST00000568626	TMED7-TICAM2	A0A0A6YYA0	188 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626		H3BML4	177 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	hCG_2039718	K7EN88	272 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	BCKDK	O14874	412 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	FCGR1A	P12314	374 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	PLA2G2A	P14555	144 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	TCEA1	P23193	301 aa	Known RBP	10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	SLC7A1	P30825	629 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	RBM34	P42696	430 aa	Known RBP	10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	CDH12	P55289	794 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	SMIM11A	P58511	58 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	RAC1	P63000	192 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	CRYZ	Q08257	329 aa	Known RBP	10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	CCNI	Q14094	377 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	GK3P	Q14409	553 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	COLEC12	Q5KU26	742 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	VASN	Q6EMK4	673 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	ZFP1	Q6P2D0	407 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	PM20D2	Q8IYS1	436 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	PAPD5	Q8NDF8	572 aa	Known RBP	10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	ST6GALNAC3	Q8NDV1	305 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	PIK3C3	Q8NEB9	887 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	CANT1	Q8WVQ1	401 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	SLC38A4	Q969I6	547 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	ABTB1	Q969K4	478 aa	Predicted RBP	10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	DDIT4L	Q96D03	193 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	SLC41A3	Q96GZ6	507 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	FNDC11	Q9BVV2	318 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	SLC19A3	Q9BZV2	496 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	CTPS2	Q9NRF8	586 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	RIMS3	Q9UJD0	308 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	SLC6A5	Q9Y345	797 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	TMED7	Q9Y3B3	224 aa		10.84	□□□□□ -0.67
FANCA-231	ENST00000568626	PRRC2C	Q9Y520	2896 aa	Known RBP	10.84	□□□□□ -0.67
FANCA-231	ENST00000568626		A0A087WUJ7	227 aa		10.83	□□□□□ -0.68
FANCA-231	ENST00000568626		A8MVM7	634 aa		10.83	□□□□□ -0.68
FANCA-231	ENST00000568626	SHISA8	B8ZZ34	492 aa		10.83	□□□□□ -0.68
FANCA-231	ENST00000568626		B8ZZF3	427 aa		10.83	□□□□□ -0.68
FANCA-231	ENST00000568626	ADAMDEC1	O15204	470 aa		10.83	□□□□□ -0.68
FANCA-231	ENST00000568626	SEMA7A	O75326	666 aa		10.83	□□□□□ -0.68
FANCA-231	ENST00000568626	FKBP6	O75344	327 aa		10.83	□□□□□ -0.68
FANCA-231	ENST00000568626	PRSS23	O95084	383 aa		10.83	□□□□□ -0.68
FANCA-231	ENST00000568626	H1F0	P07305	194 aa	Known RBP	10.83	□□□□□ -0.68

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