RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TSSK3Q96PN8 268 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 QRSL1Q9H0R6 528 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 TSPYL1Q9H0U9 437 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 SIRT3Q9NTG7 399 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 C1orf109Q9NX04 203 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 AMDHD2Q9Y303 409 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 CCL27Q9Y4X3 112 aa10.33□□□□□ -0.76
GTF3C1-209ENST00000568569 TENM1Q9UKZ4 2725 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 ESPNB1AK53 854 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 ATP6V1G2-DDX39BF2Z307 99 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 PDLIM1O00151 329 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 MRPL33O75394 65 aaKnown RBP10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 KRT16P08779 473 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 DDX5P17844 614 aaKnown RBP10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 SDC1P18827 310 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 EFNA1P20827 205 aaPredicted RBP10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 SESN3P58005 492 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 TGFBR3Q03167 851 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 C8orf74Q6P047 294 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 BHLHB9Q6PI77 547 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 SLC46A3Q7Z3Q1 461 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 WDR31Q8NA23 367 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 PIGXQ8TBF5 258 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 ADAMTS15Q8TE58 950 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 TMEM234Q8WY98 164 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 FCRL1Q96LA6 429 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 VRK1Q99986 396 aaPredicted RBP10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 SOX7Q9BT81 388 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 ACTRT3Q9BYD9 372 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 BHLHE41Q9C0J9 482 aaPredicted RBP10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 SLC17A5Q9NRA2 495 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 TMEFF2Q9UIK5 374 aaPredicted RBP10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 DCTN4Q9UJW0 460 aa10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 FAF1Q9UNN5 650 aaPredicted RBP10.32□□□□□ -0.76
GTF3C1-209ENST00000568569 ARFGEF3Q5TH69 2177 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 A0A087WUV0 522 aaPredicted RBP10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 EXOC1LA0A1B0GW35 172 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 LRP5LA4QPB2 252 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 SERINC4A6NH21 518 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 SLC28A1O00337 649 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 DNPH1O43598 174 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 DNAJA2O60884 412 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 UROSP10746 265 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 NTF4P34130 210 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 SLC16A1P53985 500 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 FOXG1P55316 489 aaPredicted RBP10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 SLC25A3Q00325 362 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 MERTKQ12866 999 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 SKP2Q13309 424 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 KLHL24Q6TFL4 600 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 CASP12Q6UXS9 341 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 FRMD7Q6ZUT3 714 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 ZNF572Q7Z3I7 529 aaPredicted RBP10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 R3HCC1LQ7Z5L2 792 aaKnown RBP10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 ANKS4BQ8N8V4 417 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 OR52E4Q8NGH9 312 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 CLHC1Q8NHS4 586 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 ZFAND2BQ8WV99 257 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 MTERF3Q96E29 417 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 FMO2Q99518 471 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 THUMPD3Q9BV44 507 aaKnown RBP10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 TNFRSF12AQ9NP84 129 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 UPB1Q9UBR1 384 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 MOKQ9UQ07 419 aa10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 SPIN1Q9Y657 262 aaPredicted RBP10.31□□□□□ -0.76
GTF3C1-209ENST00000568569 A0A0A6YYJ9 748 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 SLCO1B7G3V0H7 640 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 CYP7B1O75881 506 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 PMS2P2O95744 297 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 WNT11O96014 354 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 TFPIP10646 304 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 NEFHP12036 1026 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 PGCP20142 388 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 SERPINF1P36955 418 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 ASMTP46597 345 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 CCT3P49368 545 aaKnown RBP10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 CHN2P52757 468 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 PRPS1P60891 318 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 RPL38P63173 70 aaKnown RBP10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 TP53BP2Q13625 1128 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 ZSWIM7Q19AV6 140 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 CFAP157Q5JU67 520 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 PDZK1Q5T2W1 519 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 C9orf135Q5VTT2 229 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 CLEC6AQ6EIG7 209 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 ZYG11AQ6WRX3 759 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 LINC01356Q8N9X3 169 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 OR56A1Q8NGH5 318 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 SGMS2Q8NHU3 365 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 ACMSDQ8TDX5 336 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 HPS1Q92902 700 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 NMUR2Q9GZQ4 415 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 LAT2Q9GZY6 243 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 CA10Q9NS85 328 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 ACER3Q9NUN7 267 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 CHRNA9Q9UGM1 479 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 BAIAP2L1Q9UHR4 511 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 SLC9A8Q9Y2E8 581 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 TMED5Q9Y3A6 229 aa10.3□□□□□ -0.76
GTF3C1-209ENST00000568569 HDGFL3Q9Y3E1 203 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms