RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 PPT1P50897 306 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 HNRNPA3P51991 378 aaKnown RBP3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 WNT4P56705 351 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 TAF7Q15545 349 aaPredicted RBP3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 KLF17Q5JT82 389 aaPredicted RBP3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 ZNF530Q6P9A1 599 aaPredicted RBP3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 IGFL2Q6UWQ7 119 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 SLC38A6Q8IZM9 456 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 OR2L13Q8N349 312 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 TMEM252Q8N6L7 170 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 ALLCQ8N6M5 410 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 OR1F12Q8NHA8 337 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 N4BP2L2Q92802 583 aaPredicted RBP3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 MARC2Q969Z3 335 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 SLC35A5Q9BS91 424 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 NIPSNAP3BQ9BS92 247 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 MAGT1Q9H0U3 335 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 ZNF385DQ9H6B1 395 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 RAB18Q9NP72 206 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 AIPL1Q9NZN9 384 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 CD274Q9NZQ7 290 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 ADAM22Q9P0K1 906 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 CGNQ9P2M7 1197 aaKnown RBP3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 RPS6KB2Q9UBS0 482 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 SH3BGRL2Q9UJC5 107 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 NAP1L2Q9ULW6 460 aaPredicted RBP3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 NPIPA1Q9UND3 350 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 KIF3AQ9Y496 699 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 UGT2A1Q9Y4X1 527 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 FRMPD3Q5JV73 1810 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 ATAD2BQ9ULI0 1458 aa3.16□□□□□ -1.9
SHCBP1-206ENST00000567698 A0A1W2PNU3 283 aaPredicted RBP3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 A8MUI8 341 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 KRTAP4-16G5E9R7 235 aaPredicted RBP3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 IDH1O75874 414 aaKnown RBP3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 SUPT7LO94864 414 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 HPNP05981 417 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 NPR2P20594 1047 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 HNF1AP20823 631 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 HNRNPA2B1P22626 353 aaKnown RBP3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 CCNE1P24864 410 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 NTSP30990 170 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 BIDP55957 195 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 RIPK4P57078 832 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 ZNF763Q0D2J5 394 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 TATDN3Q17R31 274 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 BLOC1S2Q6QNY1 142 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 ACOT1Q86TX2 421 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 DHRSXQ8N5I4 330 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 OR2AP1Q8NGE2 309 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 RNF138Q8WVD3 245 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 SH3YL1Q96HL8 342 aaPredicted RBP3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 SLC35E1Q96K37 410 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 PGLYRP4Q96LB8 373 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 SPATA16Q9BXB7 569 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 RIBC2Q9H4K1 309 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 SLC17A5Q9NRA2 495 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 IL36GQ9NZH8 169 aa3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 RRP15Q9Y3B9 282 aaKnown RBP3.15□□□□□ -1.91
SHCBP1-206ENST00000567698 KDRP35968 1356 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 MBLAC1A4D2B0 266 aaPredicted RBP3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 LRP5LA4QPB2 252 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 USP27XA6NNY8 438 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 PRRG1O14668 218 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 ZNF780AO75290 641 aaPredicted RBP3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 ADCY5O95622 1261 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 LGI1O95970 557 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 ZNF17P17021 662 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 POLR2EP19388 210 aaKnown RBP3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 HOXD10P28358 340 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 OTX2P32243 289 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 CTRLP40313 264 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 APOC4P55056 127 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 TLE4Q04727 773 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 CHRNB3Q05901 458 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 SLC10A7Q0GE19 358 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 CCDC173Q0VFZ6 552 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 PDK4Q16654 411 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 TTC23Q5W5X9 447 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 RFLNAQ6ZTI6 216 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 ACOT7LQ6ZUV0 252 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 MOB3BQ86TA1 216 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 TBC1D21Q8IYX1 336 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 ANKFN1Q8N957 763 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 C20orf203Q8NBC4 194 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 STXBP6Q8NFX7 210 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 OR4D5Q8NGN0 318 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 OR9A1PQ8NGU1 263 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 FBXO30Q8TB52 745 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 ZNF606Q8WXB4 792 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 ELSPBP1Q96BH3 223 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 TMEM101Q96IK0 257 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 C7orf34Q96L11 122 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 EDEM2Q9BV94 578 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 NXF5Q9H1B4 397 aaKnown RBP3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 RMND5AQ9H871 391 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 SH2D2AQ9NP31 389 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 FARSBQ9NSD9 589 aaKnown RBP3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms