RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 C16orf62Q7Z3J2 963 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 DTX2Q86UW9 622 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 ZNF100Q8IYN0 542 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 CLECL1Q8IZS7 167 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 ZNF619Q8N2I2 560 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 FAM71CQ8NEG0 241 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 TESCQ96BS2 214 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 ZHX1-C8orf76Q96EF9 292 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 ZNF300Q96RE9 604 aaPredicted RBP13.26□□□□□ -0.29
RNF40-209ENST00000566703 DPY30Q9C005 99 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 QRSL1Q9H0R6 528 aaKnown RBP13.26□□□□□ -0.29
RNF40-209ENST00000566703 OR51I1Q9H343 314 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 AKTIPQ9H8T0 292 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 BARX1Q9HBU1 254 aaPredicted RBP13.26□□□□□ -0.29
RNF40-209ENST00000566703 CISD1Q9NZ45 108 aaKnown RBP13.26□□□□□ -0.29
RNF40-209ENST00000566703 HDGFL3Q9Y3E1 203 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 WDR45Q9Y484 360 aa13.26□□□□□ -0.29
RNF40-209ENST00000566703 OR5H1A6NKK0 313 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 GPR171O14626 319 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 BIRC5O15392 142 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 KIAA0513O60268 411 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 LYZL6O75951 148 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 PMS2P2O95744 297 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 SERPINE1P05121 402 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 OR12D1P0DN82 309 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 FBXW9Q5XUX1 488 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 EMBQ6PCB8 327 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 DNM1P46Q6ZS02 220 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 GRINAQ7Z429 371 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 OR4A15Q8NGL6 344 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 XAGE5Q8WWM1 108 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 NEUROG1Q92886 237 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 TRAF4Q9BUZ4 470 aaPredicted RBP13.25□□□□□ -0.29
RNF40-209ENST00000566703 CCDC106Q9BWC9 280 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 SLCO5A1Q9H2Y9 848 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 ALG2Q9H553 416 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 EXOSC3Q9NQT5 275 aaKnown RBP13.25□□□□□ -0.29
RNF40-209ENST00000566703 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.25□□□□□ -0.29
RNF40-209ENST00000566703 FAIMQ9NVQ4 179 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 PRDM4Q9UKN5 801 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 MGAT4BQ9UQ53 548 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 TRAPPC4Q9Y296 219 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 RAP2CQ9Y3L5 183 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 MAGED1Q9Y5V3 778 aaPredicted RBP13.25□□□□□ -0.29
RNF40-209ENST00000566703 HIVEP2P31629 2446 aa13.25□□□□□ -0.29
RNF40-209ENST00000566703 NUP214P35658 2090 aaPredicted RBP13.25□□□□□ -0.29
RNF40-209ENST00000566703 SHISA9B4DS77 424 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 C9JVG2 144 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 RNF223E7ERA6 249 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 CD8AP01732 235 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 TFPIP10646 304 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 SLC16A1P53985 500 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 ABCE1P61221 599 aaKnown RBP13.24□□□□□ -0.29
RNF40-209ENST00000566703 VSNL1P62760 191 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 PHC1P78364 1004 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 TXNL4AP83876 142 aaKnown RBP13.24□□□□□ -0.29
RNF40-209ENST00000566703 KRTAP1-1Q07627 177 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 STK11Q15831 433 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 MAPK14Q16539 360 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 DPY19L1Q2PZI1 675 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 C1QTNF12Q5T7M4 302 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 AGAP6Q5VW22 663 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 SAXO2Q658L1 398 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 ABLIM2Q6H8Q1 611 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 TYW3Q6IPR3 259 aaKnown RBP13.24□□□□□ -0.29
RNF40-209ENST00000566703 CLEC4FQ8N1N0 589 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 ZNF433Q8N7K0 673 aaPredicted RBP13.24□□□□□ -0.29
RNF40-209ENST00000566703 KBTBD8Q8NFY9 601 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 ZNF563Q8TA94 476 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 PIGXQ8TBF5 258 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 AENQ8WTP8 325 aaKnown RBP13.24□□□□□ -0.29
RNF40-209ENST00000566703 ZNF775Q96BV0 537 aaPredicted RBP13.24□□□□□ -0.29
RNF40-209ENST00000566703 ROPN1LQ96C74 230 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 NEURL3Q96EH8 262 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 MDFIQ99750 246 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 SSU72Q9NP77 194 aaKnown RBP13.24□□□□□ -0.29
RNF40-209ENST00000566703 CHRNA9Q9UGM1 479 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 NOSIPQ9Y314 301 aaKnown RBP13.24□□□□□ -0.29
RNF40-209ENST00000566703 PRR14LQ5THK1 2151 aa13.24□□□□□ -0.29
RNF40-209ENST00000566703 CENPVL1A0A0U1RR11 272 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 ITM2AO43736 263 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 TLX2O43763 284 aaPredicted RBP13.23□□□□□ -0.29
RNF40-209ENST00000566703 CPSF4O95639 269 aaKnown RBP13.23□□□□□ -0.29
RNF40-209ENST00000566703 EDNRAP25101 427 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 ACVR1BP36896 505 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 CDKN1AP38936 164 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 HTR3AP46098 478 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 RPL14P50914 215 aaKnown RBP13.23□□□□□ -0.29
RNF40-209ENST00000566703 MAP2K6P52564 334 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 CLNS1AP54105 237 aaKnown RBP13.23□□□□□ -0.29
RNF40-209ENST00000566703 KCNJ10P78508 379 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 DMTNQ08495 405 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 CASP8Q14790 479 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 PDCD2Q16342 344 aaPredicted RBP13.23□□□□□ -0.29
RNF40-209ENST00000566703 NRF1Q16656 503 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 TMEM108Q6UXF1 575 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 FRRS1Q6ZNA5 592 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 ATG4DQ86TL0 474 aaPredicted RBP13.23□□□□□ -0.29
RNF40-209ENST00000566703 ADGRG3Q86Y34 549 aa13.23□□□□□ -0.29
RNF40-209ENST00000566703 CMIPQ8IY22 773 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms