RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 PYDC1Q8WXC3 89 aa13.41□□□□□ -0.26
SPG7-213ENST00000566221 ZNF300Q96RE9 604 aaPredicted RBP13.41□□□□□ -0.26
SPG7-213ENST00000566221 ZNF347Q96SE7 839 aa13.41□□□□□ -0.26
SPG7-213ENST00000566221 PIGQQ9BRB3 760 aa13.41□□□□□ -0.26
SPG7-213ENST00000566221 ACKR4Q9NPB9 350 aa13.41□□□□□ -0.26
SPG7-213ENST00000566221 SELENONQ9NZV5 590 aa13.41□□□□□ -0.26
SPG7-213ENST00000566221 NDUFAF4Q9P032 175 aa13.41□□□□□ -0.26
SPG7-213ENST00000566221 STOML1Q9UBI4 398 aa13.41□□□□□ -0.26
SPG7-213ENST00000566221 NTNG1Q9Y2I2 539 aa13.41□□□□□ -0.26
SPG7-213ENST00000566221 A0A0B4J2E0 115 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 A0A1B0GX12 115 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 H3BNX3 289 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 ZIC3O60481 467 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 NTN1O95631 604 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 THRBP10828 461 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 ANPEPP15144 967 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 TCEA1P23193 301 aaKnown RBP13.4□□□□□ -0.26
SPG7-213ENST00000566221 ADH6P28332 368 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 POLR2HP52434 150 aaKnown RBP13.4□□□□□ -0.26
SPG7-213ENST00000566221 MERTKQ12866 999 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 SLC10A1Q14973 349 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 IQCCQ4KMZ1 466 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 ULK3Q6PHR2 472 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 TSEN54Q7Z6J9 526 aaKnown RBP13.4□□□□□ -0.26
SPG7-213ENST00000566221 YRDCQ86U90 279 aaKnown RBP13.4□□□□□ -0.26
SPG7-213ENST00000566221 SIAH3Q8IW03 269 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 OFCC1Q8IZS5 231 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 SLCO4A1Q96BD0 722 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 C3orf49Q96BT1 292 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 PIP5K1AQ99755 562 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 PRR14Q9BWN1 585 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 CHID1Q9BWS9 393 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 C12orf10Q9HB07 376 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 CTPS2Q9NRF8 586 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 ACAD8Q9UKU7 415 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 A4GNTQ9UNA3 340 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 ZGRF1Q86YA3 2104 aa13.4□□□□□ -0.26
SPG7-213ENST00000566221 SHANK1Q9Y566 2161 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 LINC01387J3KSC0 135 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 J3KTA2 159 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 CHP2O43745 196 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 SEMA7AO75326 666 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 IGHG3P01860 377 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 MT-ND1P03886 318 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 CELA3AP09093 270 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 PNMTP11086 282 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 TACR3P29371 465 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 APOBEC1P41238 236 aaKnown RBP13.39□□□□□ -0.27
SPG7-213ENST00000566221 YAP1P46937 504 aaKnown RBP13.39□□□□□ -0.27
SPG7-213ENST00000566221 TMEM44Q2T9K0 475 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 CMPK2Q5EBM0 449 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 ALG10BQ5I7T1 473 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 WIPI1Q5MNZ9 446 aaPredicted RBP13.39□□□□□ -0.27
SPG7-213ENST00000566221 TSPYL5Q86VY4 417 aaPredicted RBP13.39□□□□□ -0.27
SPG7-213ENST00000566221 PQLC1Q8N2U9 271 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 ZNF524Q96C55 264 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 SLC41A3Q96GZ6 507 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 SFXN2Q96NB2 322 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 FNDC11Q9BVV2 318 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 ADAM19Q9H013 955 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 SLC6A15Q9H2J7 730 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 SLC7A7Q9UM01 511 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 RPH3AQ9Y2J0 694 aaPredicted RBP13.39□□□□□ -0.27
SPG7-213ENST00000566221 KALRNO60229 2985 aa13.39□□□□□ -0.27
SPG7-213ENST00000566221 TRGV5A0A0B4J1U4 118 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 OR2M5A3KFT3 312 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 ELOA3DA6NLF2 546 aaPredicted RBP13.38□□□□□ -0.27
SPG7-213ENST00000566221 SHISA8B8ZZ34 492 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 FFAR1O14842 300 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 ADAMDEC1O15204 470 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 HCN1O60741 890 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 DIRAS1O95057 198 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 PRSS23O95084 383 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 BAG2O95816 211 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 CHMP24386 653 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 CXCR1P25024 350 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 FASP25445 335 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 MAP2K6P52564 334 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 CDH12P55289 794 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 SMIM11AP58511 58 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 B3GALT5-AS1P59052 145 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 SPIBQ01892 262 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 ST3GAL3Q11203 375 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 SELENBP1Q13228 472 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 PIN1Q13526 163 aaPredicted RBP13.38□□□□□ -0.27
SPG7-213ENST00000566221 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.38□□□□□ -0.276e-10■□□□□ 9.5
SPG7-213ENST00000566221 ELOA3BQ3SY89 546 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 C3orf33Q6P1S2 294 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 GDF7Q7Z4P5 450 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 ATG4DQ86TL0 474 aaPredicted RBP13.38□□□□□ -0.27
SPG7-213ENST00000566221 CISD2Q8N5K1 135 aaKnown RBP13.38□□□□□ -0.27
SPG7-213ENST00000566221 ELOA3Q8NG57 546 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 NEIL3Q8TAT5 605 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 RNF217Q8TC41 542 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 POC1BQ8TC44 478 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 SLC25A43Q8WUT9 341 aaPredicted RBP13.38□□□□□ -0.27
SPG7-213ENST00000566221 SLC38A4Q969I6 547 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 MPP4Q96JB8 637 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 DHRS1Q96LJ7 313 aa13.38□□□□□ -0.27
SPG7-213ENST00000566221 NPAS1Q99742 590 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms