RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 FOXF2Q12947 444 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 LARS2Q15031 903 aaKnown RBP12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 PON3Q15166 354 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 CYP51A1Q16850 503 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 CTU2Q2VPK5 515 aaKnown RBP12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 FBXL19-AS1Q494R0 122 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 ZNF311Q5JNZ3 666 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 SERPINA11Q86U17 422 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 CALHM3Q86XJ0 350 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 MCEMP1Q8IX19 187 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 DMRTC2Q8IXT2 367 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 C11orf65Q8NCR3 313 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 OR10D3Q8NH80 312 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 TMEM234Q8WY98 164 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 ST8SIA1Q92185 356 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 FIG4Q92562 907 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 ADGRG7Q96K78 797 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 SH3GL1Q99961 368 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 SPATA9Q9BWV2 254 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 CACYBPQ9HB71 228 aaKnown RBP12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 SLC24A3Q9HC58 644 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 ACER3Q9NUN7 267 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 FOXD3Q9UJU5 478 aaPredicted RBP12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 ANGPT4Q9Y264 503 aa12.42□□□□□ -0.42
HERPUD1-210ENST00000565966 A0A0J9YW62 118 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 GJE1A6NN92 205 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 AP3D1O14617 1153 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 TNFSF11O14788 317 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 MAST4O15021 2626 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 GCM2O75603 506 aaPredicted RBP12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 FAM107AO95990 144 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 PRDX6P30041 224 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 PEX19P40855 299 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 PCBP3P57721 371 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 SELENBP1Q13228 472 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 ZSWIM7Q19AV6 140 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 FREM1Q5H8C1 2179 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 PLEKHM3Q6ZWE6 761 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 KRT73Q86Y46 540 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 ZNF440Q8IYI8 595 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 GCNT2Q8N0V5 402 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 ANKS4BQ8N8V4 417 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 OR2V1Q8NHB1 315 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 ZNF563Q8TA94 476 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 FNDC9Q8TBE3 224 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 RNASE6Q93091 150 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 CMTM5Q96DZ9 223 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 KLHL15Q96M94 604 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 ZNF583Q96ND8 569 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 ZNF607Q96SK3 696 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 ECSITQ9BQ95 431 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 GPATCH1Q9BRR8 931 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 PRRG4Q9BZD6 226 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 PIF1Q9H611 641 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 TMEM185BQ9H7F4 350 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 RNF122Q9H9V4 155 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 JKAMPQ9P055 326 aa12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 MCTS1Q9ULC4 181 aaKnown RBP12.41□□□□□ -0.42
HERPUD1-210ENST00000565966 DCHS2Q6V1P9 2916 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 A0A1W2PNV4 684 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 CFAP73A6NFT4 308 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 FAAHO00519 579 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 CXCL13O43927 109 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 GKN3PP0CG01 181 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 FCGR2AP12318 317 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 PRF1P14222 555 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 SHC1P29353 583 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 AQP1P29972 269 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 PRKAR1BP31321 381 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 PCGF2P35227 344 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 SFTPDP35247 375 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 ACAA2P42765 397 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 IDH2P48735 452 aaKnown RBP12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 CARD18P57730 90 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 MERTKQ12866 999 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 VMACQ2NL98 169 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 TMEM176BQ3YBM2 270 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 HBMQ6B0K9 141 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 C8orf82Q6P1X6 216 aaPredicted RBP12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 DHRS4L2Q6PKH6 230 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 SLC30A8Q8IWU4 369 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 ZNF295-AS1Q8N0V1 137 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 OSTF1Q92882 214 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 SPATA5L1Q9BVQ7 753 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 PIGMQ9H3S5 423 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 ARMC7Q9H6L4 198 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 EFCAB1Q9HAE3 211 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 TIGARQ9NQ88 270 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 SERINC1Q9NRX5 453 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 CMTM6Q9NX76 183 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 USP22Q9UPT9 525 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 ABCA12Q86UK0 2595 aa12.4□□□□□ -0.42
HERPUD1-210ENST00000565966 ANKHD1Q8IWZ3 2542 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 EEF1E1-BLOC1S5C9J1V9 151 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 M0QX08 132 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 EEF1E1O43324 174 aaKnown RBP12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 TPST1O60507 370 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 SERPINB7O75635 380 aa12.39□□□□□ -0.43
HERPUD1-210ENST00000565966 TNFSF13O75888 250 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms