RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 G3V3Y1 287 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 KPNA4O00629 521 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-213ENST00000565834 SNPHO15079 494 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 CAPGP40121 348 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 OMPP47874 163 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 ZNF41P51814 821 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-213ENST00000565834 MFAP5Q13361 173 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 KLHL17Q6TDP4 642 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 PLCZ1Q86YW0 608 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 PARP8Q8N3A8 854 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 FADS6Q8N9I5 356 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 WDSUB1Q8N9V3 476 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 ZNF555Q8NEP9 628 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 PFN4Q8NHR9 129 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 TMEM41AQ96HV5 264 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 FAM46AQ96IP4 442 aaKnown RBP17.04■□□□□ 0.32
COMMD4-213ENST00000565834 PTGES2Q9H7Z7 377 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 PLA2G3Q9NZ20 509 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 H0YAE9 185 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 ADRB1P08588 477 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 GSTM3P21266 225 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 PRKCDQ05655 676 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 OR1C1Q15619 314 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 SLC36A3Q495N2 470 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 SPINK14Q6IE38 97 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 GRINAQ7Z429 371 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 MEX3DQ86XN8 651 aaKnown RBP17.04■□□□□ 0.32
COMMD4-213ENST00000565834 GABARAPL3Q9BY60 117 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 ZNF552Q9H707 407 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-213ENST00000565834 MED17Q9NVC6 651 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 FAM118AQ9NWS6 357 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 OSGIN1Q9UJX0 560 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 FBXL2Q9UKC9 423 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 TMEM5Q9Y2B1 443 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 LRCH1Q9Y2L9 728 aa17.04■□□□□ 0.32
COMMD4-213ENST00000565834 FAM47E-STBD1D6RA91 191 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 DENRO43583 198 aaKnown RBP17.03■□□□□ 0.32
COMMD4-213ENST00000565834 SLC25A12O75746 678 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 NEURL1O76050 574 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 IFI30P13284 250 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 PRKCAP17252 672 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 CXCR1P25024 350 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 GPR4P46093 362 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 HTR3AP46098 478 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 GSSP48637 474 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 POLR2HP52434 150 aaKnown RBP17.03■□□□□ 0.32
COMMD4-213ENST00000565834 ADARB1P78563 741 aaKnown RBP17.03■□□□□ 0.32
COMMD4-213ENST00000565834 ALDH6A1Q02252 535 aaKnown RBP17.03■□□□□ 0.32
COMMD4-213ENST00000565834 COX10Q12887 443 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 NPRL3Q12980 569 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 TSPAN31Q12999 210 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 CMPK2Q5EBM0 449 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 TTC23Q5W5X9 447 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 ARSKQ6UWY0 536 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 CD300LDQ6UXZ3 194 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 CCDC81Q6ZN84 652 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 LSRQ86X29 649 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-213ENST00000565834 SPACA3Q8IXA5 215 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 CDK20Q8IZL9 346 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 OR1J4Q8NGS1 313 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 JSRP1Q96MG2 331 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-213ENST00000565834 SIGLEC12Q96PQ1 595 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 GPA33Q99795 319 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 SLC19A3Q9BZV2 496 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 RNF32Q9H0A6 362 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 MEPEQ9NQ76 525 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-213ENST00000565834 VDAC3Q9Y277 283 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 SSUH2Q9Y2M2 353 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 PCDHGB6Q9Y5F9 930 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 KCNMB2Q9Y691 235 aa17.03■□□□□ 0.32
COMMD4-213ENST00000565834 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 OR5H15A6NDH6 313 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 TRIM3O75382 744 aaPredicted RBP17.02■□□□□ 0.32
COMMD4-213ENST00000565834 FPR3P25089 353 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 POLR2IP36954 125 aaKnown RBP17.02■□□□□ 0.32
COMMD4-213ENST00000565834 DNASE1L1P49184 302 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 CTBP2P56545 445 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 MED21Q13503 144 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 TIGD3Q6B0B8 471 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 POMZP3Q6PJE2 187 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 P3H2Q8IVL5 708 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 FDCSPQ8NFU4 85 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 BPIFA2Q96DR5 249 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 C1GALT1C1Q96EU7 318 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 TMEM43Q9BTV4 400 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 GRIP2Q9C0E4 1043 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 C20orf141Q9NUB4 165 aa17.02■□□□□ 0.32
COMMD4-213ENST00000565834 TMED7-TICAM2A0A0A6YYA0 188 aa17.01■□□□□ 0.31
COMMD4-213ENST00000565834 A0A0G2JMM0 328 aa17.01■□□□□ 0.31
COMMD4-213ENST00000565834 A0A1W2PPB8 328 aa17.01■□□□□ 0.31
COMMD4-213ENST00000565834 A0A1W2PRS3 328 aa17.01■□□□□ 0.31
COMMD4-213ENST00000565834 KIR3DP1A8MWS1 328 aa17.01■□□□□ 0.31
COMMD4-213ENST00000565834 OSMP13725 252 aa17.01■□□□□ 0.31
COMMD4-213ENST00000565834 CNR1P21554 472 aa17.01■□□□□ 0.31
COMMD4-213ENST00000565834 EIF2S3P41091 472 aaKnown RBP17.01■□□□□ 0.31
COMMD4-213ENST00000565834 ESRRGP62508 458 aa17.01■□□□□ 0.31
COMMD4-213ENST00000565834 CRYZQ08257 329 aaKnown RBP17.01■□□□□ 0.31
COMMD4-213ENST00000565834 PLPPR5Q32ZL2 321 aa17.01■□□□□ 0.31
COMMD4-213ENST00000565834 CHERPQ8IWX8 916 aaKnown RBP17.01■□□□□ 0.31
COMMD4-213ENST00000565834 CNBD2Q96M20 576 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms