RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 ZNF223Q9UK11 482 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 MRPS18BQ9Y676 258 aaKnown RBP11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 KLK10O43240 276 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 TLX3O43711 291 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 PIP5K1CO60331 668 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 DDAH2O95865 285 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 DBTP11182 482 aaKnown RBP11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 CD36P16671 472 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 NR4A1P22736 598 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 PSMD4P55036 377 aaKnown RBP11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 SLC26A5P58743 744 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 ZNF91Q05481 1191 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 IL10RAQ13651 578 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 FGFBP1Q14512 234 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 SYT14P1Q58G82 188 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 ZNF620Q6ZNG0 422 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 ZNF367Q7RTV3 350 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 ZSCAN1Q8NBB4 408 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 TBC1D15Q8TC07 691 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 ZNF721Q8TF20 911 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 CNOT9Q92600 299 aaKnown RBP11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 FER1L6-AS2Q96M78 137 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 CCNL2Q96S94 520 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 DNAJB12Q9NXW2 375 aaKnown RBP11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 CBLCQ9ULV8 474 aa11.61□□□□□ -0.55
NSMCE1-208ENST00000565070 A0A0B4J2E0 115 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 IGHV3-20A0A0C4DH32 117 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 A0A1B0GX12 115 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 IGKV3-11P04433 115 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 ACAA2P42765 397 aaKnown RBP11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 GPR4P46093 362 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 RFX3P48380 749 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 RNF144AP50876 292 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 ATP12AP54707 1039 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 SLC37A1P57057 533 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 SNAPC1Q16533 368 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 SLC29A4Q7RTT9 530 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 CMIPQ8IY22 773 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 AMER2Q8N7J2 671 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 BCORP1Q8N888 145 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 LSMEM1Q8N8F7 131 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 NFAM1Q8NET5 270 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 OR8K3Q8NH51 312 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 TMEM163Q8TC26 289 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 M1APQ8TC57 530 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 TMEM239Q8WW34 195 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 TMEM80Q96HE8 168 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 LRR1Q96L50 414 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 IMMP1LQ96LU5 166 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 SLC38A2Q96QD8 506 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 MESP1Q9BRJ9 268 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 TSSK6Q9BXA6 273 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 PRRG3Q9BZD7 231 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 SEMA4CQ9C0C4 833 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 FBXL4Q9UKA2 621 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 CDH10Q9Y6N8 788 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 DCHS1Q96JQ0 3298 aa11.6□□□□□ -0.55
NSMCE1-208ENST00000565070 CDC42EP2O14613 210 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 GPR143P51810 404 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 RRADP55042 308 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 PSPHP78330 225 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 PRKCDQ05655 676 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 BTBD16Q32M84 506 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 HSDL2Q6YN16 418 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 SLC46A3Q7Z3Q1 461 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 BCDIN3DQ7Z5W3 292 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 BRIX1Q8TDN6 353 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 OIT3Q8WWZ8 545 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 ZNF582Q96NG8 517 aaPredicted RBP11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 ZNF426Q9BUY5 554 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 TMEM27Q9HBJ8 222 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 MMP25Q9NPA2 562 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 RYDENQ9NUL5 291 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 MRPS18AQ9NVS2 196 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 TAS2R16Q9NYV7 291 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 CACNA1AO00555 2505 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 CDC14CA4D256 554 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 PRODHO43272 600 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 CHP2O43745 196 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 ADAM11O75078 769 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 CLPXO76031 633 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 INHBBP09529 407 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 EIF2S3P41091 472 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 CTBP2P56545 445 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 DCAF7P61962 342 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 DCTN2Q13561 401 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 ATP1A4Q13733 1029 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 HLA-DQA1Q5Y7H0 255 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 TMPRSS11FQ6ZWK6 438 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 ZNF321PQ8N8H1 164 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 APCDD1LQ8NCL9 501 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 OR5L2Q8NGL0 311 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 OR4Q3Q8NH05 313 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 LGALS12Q96DT0 336 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 NUDT9Q9BW91 350 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 TRIM2Q9C040 744 aa11.59□□□□□ -0.55
NSMCE1-208ENST00000565070 ZNF160Q9HCG1 818 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms