RNA–Protein interactions for RNA: ENST00000564743.1

AC009088.2-201, humanhuman

TSL 5 BASIC

Gene AC009088.2, Length 463 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.2-201ENST00000564743 HMGN4O00479 90 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 HS3ST1O14792 307 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 SMAD9O15198 467 aaKnown RBP12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 HDAC3O15379 428 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 CYTIPO60759 359 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 PLAUP00749 431 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 PGRP06401 933 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 FESP07332 822 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 KITP10721 976 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 OR3A2P47893 321 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 WDR4P57081 412 aaKnown RBP12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 KCNJ10P78508 379 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 TXNL4AP83876 142 aaKnown RBP12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 CHRNEQ04844 493 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 LRRC74AQ0VAA2 488 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 ATG16L1Q676U5 607 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 NXNQ6DKJ4 435 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 PRSS57Q6UWY2 283 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 ZNF621Q6ZSS3 439 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 TMPPEQ6ZT21 453 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 FAM71CQ8NEG0 241 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 HSD17B8Q92506 261 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 ZNF775Q96BV0 537 aaPredicted RBP12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 ZHX1-C8orf76Q96EF9 292 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 Q96MF0 132 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 SMR3AQ99954 134 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 USB1Q9BQ65 265 aaKnown RBP12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 CXorf56Q9H5V9 222 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 WDR55Q9H6Y2 383 aaPredicted RBP12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 EXOSC3Q9NQT5 275 aaKnown RBP12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 CTPS2Q9NRF8 586 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 NKIRAS1Q9NYS0 192 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 EMC3Q9P0I2 261 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 LIPT1Q9Y234 373 aa12.91□□□□□ -0.34
AC009088.2-201ENST00000564743 NUP214P35658 2090 aaPredicted RBP12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 ZNF724A8MTY0 619 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 FAM171A2A8MVW0 826 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 ZNF814B7Z6K7 855 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 SLCO1B7G3V0H7 640 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 BCAS1O75363 584 aaPredicted RBP12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 GSNP06396 782 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 EPHA3P29320 983 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 PTH2RP49190 550 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 ITGADQ13349 1161 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 GNA13Q14344 377 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 SYPL1Q16563 259 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 KRTAP21-3Q3LHN1 58 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 CLEC9AQ6UXN8 241 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 Q6ZT83 130 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 BHLHA15Q7RTS1 189 aaPredicted RBP12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 GRINAQ7Z429 371 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 GALNT5Q7Z7M9 940 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 ZNF100Q8IYN0 542 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 ANKFN1Q8N957 763 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 GLB1L3Q8NCI6 653 aaPredicted RBP12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 AKAP1Q92667 903 aaKnown RBP eCLIP12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 ZG16BQ96DA0 208 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 TRNT1Q96Q11 434 aaKnown RBP12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 ZNF300Q96RE9 604 aaPredicted RBP12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 TMEM204Q9BSN7 226 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 INPP5KQ9BT40 448 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 CCDC106Q9BWC9 280 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 POTEKPQ9BYX7 375 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 GSX2Q9BZM3 304 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 ESRP2Q9H6T0 727 aaKnown RBP12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 CHRNA9Q9UGM1 479 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 ING1Q9UK53 422 aaPredicted RBP12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 RNF115Q9Y4L5 304 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 GPR45Q9Y5Y3 372 aa12.9□□□□□ -0.34
AC009088.2-201ENST00000564743 PRAMEF27A3QJZ7 478 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 CLDN24A6NM45 220 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 H7C1Q1 480 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 CLOCKO15516 846 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 SNNO75324 88 aaPredicted RBP12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 LYZL6O75951 148 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 KRT75O95678 551 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 C1QCP02747 245 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 CD3EP07766 207 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 NR2F1P10589 423 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 HOXB4P17483 251 aaPredicted RBP12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 FKBP2P26885 142 aaKnown RBP12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 IL12AP29459 219 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 CDKN2CP42773 168 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 HTR3AP46098 478 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 IDH2P48735 452 aaKnown RBP12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 LTBQ06643 244 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 TAB1Q15750 504 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 STK11Q15831 433 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 AP1ARQ63HQ0 302 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 Q71RC1 249 aaPredicted RBP12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 MTDHQ86UE4 582 aaKnown RBP12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 CMIPQ8IY22 773 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 ZNF611Q8N823 705 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 RAB3IL1Q8TBN0 382 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 PNPT1Q8TCS8 783 aaKnown RBP12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 CNOT9Q92600 299 aaKnown RBP12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 BDH2Q9BUT1 245 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 PRSS50Q9UI38 385 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 HDGFL3Q9Y3E1 203 aa12.89□□□□□ -0.35
AC009088.2-201ENST00000564743 AGAP5A6NIR3 686 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms