RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 PDZD11Q5EBL8 140 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 FAHD1Q6P587 224 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 ZNF550Q7Z398 422 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 OR4K5Q8NGD3 323 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 NUDCD2Q8WVJ2 157 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 CRTAC1Q9NQ79 661 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 GON4LQ3T8J9 2241 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 TRAV18A0A075B6X5 111 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 SLC16A5O15375 505 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 ITGB8P26012 769 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 ARL3P36405 182 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 CARD18P57730 90 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 NIPAL3Q6P499 406 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 GDPD4Q6W3E5 623 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 TVP23CQ96ET8 276 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 SMDT1Q9H4I9 107 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 MUTYHQ9UIF7 546 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 KCNG2Q9UJ96 466 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 PITPNC1Q9UKF7 332 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 KCTD3Q9Y597 815 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 LRP5LA4QPB2 252 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 SYT5O00445 386 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 MMP3P08254 477 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 SP2Q02086 613 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 TMPRSS11FQ6ZWK6 438 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 OVCH1Q7RTY7 1134 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 UBE3DQ7Z6J8 389 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 C7orf61Q8IZ16 206 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 GPR173Q9NS66 373 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 EPHA6Q9UF33 1036 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 V9GYH0 126 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 TSPAN3O60637 253 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 OPN1LWP04000 364 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 HLA-DQB2P05538 268 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 GNG10P50151 68 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 RIDAP52758 137 aaKnown RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 MANEAQ5SRI9 462 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 TREML2Q5T2D2 321 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 ZNF620Q6ZNG0 422 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 C19orf35Q6ZS72 473 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 BAGE3Q86Y29 109 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 BAGE2Q86Y30 109 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 GALNT16Q8N428 558 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CCDC74BQ96LY2 380 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CABLES2Q9BTV7 478 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 FKBPLQ9UIM3 349 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 IGLV3-22A0A075B6J6 115 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 TMEM189-UBE2V1I3L0A0 370 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 RBMXL2O75526 392 aaKnown RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 SULT1A3P0DMM9 295 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 SULT1A4P0DMN0 295 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 MPIP34949 423 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 GSG1Q2KHT4 349 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 KCTD18Q6PI47 426 aaPredicted RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 FAM58AQ8N1B3 248 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 OR5AK2Q8NH90 309 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 MOB1AQ9H8S9 216 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CPA4Q9UI42 421 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 FBXO7Q9Y3I1 522 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 DNMT3AQ9Y6K1 912 aaPredicted RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 A0A1B0GV90 55 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 GPR182O15218 404 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 SLC25A27O95847 323 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 SNRPD1P62314 119 aaKnown RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 EBPQ15125 230 aaKnown RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 ADGRF1Q5T601 910 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 LIPNQ5VXI9 398 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 NPAS4Q8IUM7 802 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 OR5L2Q8NGL0 311 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 KCTD13Q8WZ19 329 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CASD1Q96PB1 797 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 BRF2Q9HAW0 419 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 ASIC5Q9NY37 505 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 MARCH2Q9P0N8 246 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 DCTN6O00399 190 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 INSIG1O15503 277 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 GRIN3BO60391 1043 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 APEHP13798 732 aaKnown RBP5.87□□□□□ -1.47
CLK3-212ENST00000563418 VIPR1P32241 457 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 SERPINA9Q86WD7 417 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 SIGLECL1Q8N7X8 197 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 LGALS14Q8TCE9 139 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 RBP7Q96R05 134 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 GMLQ99445 158 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 DPH7Q9BTV6 452 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 OR10H2O60403 315 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CH25HO95992 272 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 TNFSF9P41273 254 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 ATF6BQ99941 703 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 GPR87Q9BY21 358 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 DPH1Q9BZG8 443 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 SNX11Q9Y5W9 270 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 PTGDR2Q9Y5Y4 395 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 C7orf66A4D0T2 115 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 NDUFA2O43678 99 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 OR5AC1P0C628 307 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 GABRA1P14867 456 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 MAXP61244 160 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CRHR2Q13324 411 aa5.87□□□□□ -1.47
CLK3-212ENST00000563418 CLINT1Q14677 625 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms