RNA–Protein interactions for RNA: ENST00000563350.1

ITFG1-205, Transcript of integrin alpha FG-GAP repeat containing 1, human

TSL 3

Gene ITFG1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITFG1-205	ENST00000563350	ZBP1	Q9H171	429 aa		4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	PNN	Q9H307	717 aa	Known RBP	4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	ZNF385D	Q9H6B1	395 aa		4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	SMYD3	Q9H7B4	428 aa		4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	TMEM185B	Q9H7F4	350 aa		4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	RPRD1B	Q9NQG5	326 aa	Known RBP	4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	NANS	Q9NR45	359 aa		4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	IMPAD1	Q9NX62	359 aa		4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	PHF11	Q9UIL8	331 aa		4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	CSDC2	Q9Y534	153 aa	Known RBP	4.9	□□□□□ -1.63
ITFG1-205	ENST00000563350	IGHV3OR16-10	A0A075B7F0	116 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	LOC100131303	A0A0U1RQF7	123 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	FRG2C	A6NGY1	282 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	VSTM2B	A6NLU5	285 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350		C9JVG2	144 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	RNH1	P13489	461 aa	Known RBP	4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	CHML	P26374	656 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	DAP3	P51398	398 aa	Known RBP	4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	SLC8A3	P57103	927 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	RPS15	P62841	145 aa	Known RBP	4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	IL18	Q14116	193 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	VGLL4	Q14135	290 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	NHLRC3	Q5JS37	347 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	LEMD1	Q68G75	181 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	ZNF613	Q6PF04	617 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	CCDC65	Q8IXS2	484 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	OFCC1	Q8IZS5	231 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	TOMM40L	Q969M1	308 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	CXorf40B	Q96DE9	158 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	NUS1	Q96E22	293 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	CCT8L2	Q96SF2	557 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	GLT8D2	Q9H1C3	349 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	ADNP	Q9H2P0	1102 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	ZNF160	Q9HCG1	818 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	SENP1	Q9P0U3	644 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	WARS2	Q9UGM6	360 aa	Known RBP	4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	RIMS3	Q9UJD0	308 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	ZNF580	Q9UK33	172 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	ANGPTL2	Q9UKU9	493 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350	NINL	Q9Y2I6	1382 aa		4.89	□□□□□ -1.63
ITFG1-205	ENST00000563350		A0A1W2PPV9	198 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350		B4DXG7	233 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350		E7ESA3	106 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	SCRG1	O75711	98 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	SLC2A10	O95528	541 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	COX5A	P20674	150 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	XCR1	P46094	333 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	EFNA3	P52797	238 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	CDH6	P55285	790 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	ELAVL2	Q12926	359 aa	Known RBP	4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	LTB4R	Q15722	352 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	MICB	Q29980	383 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	UFSP1	Q6NVU6	142 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	BHLHA9	Q7RTU4	235 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	FAM184A	Q8NB25	1140 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	TCTEX1D2	Q8WW35	142 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	ELMO1	Q92556	727 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	ZNF75CP	Q92670	426 aa	Predicted RBP	4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	PEX13	Q92968	403 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	IFT74	Q96LB3	600 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	TECTB	Q96PL2	329 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	MCHR1	Q99705	422 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	LRRC61	Q9BV99	259 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	HEXA-AS1	Q9H8Q6	139 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	ANKRA2	Q9H9E1	313 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	CAB39L	Q9H9S4	337 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	COPS3	Q9UNS2	423 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350	ERVW-1	Q9UQF0	538 aa		4.88	□□□□□ -1.63
ITFG1-205	ENST00000563350		A0A087WYN8	130 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	CCT8L1P	A6NM43	557 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	EFCAB7	A8K855	629 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	IDS	B3KWA1	339 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	KIF2A	O00139	706 aa	Predicted RBP	4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	SULT2B1	O00204	365 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	ZG16	O60844	167 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	GNA14	O95837	355 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	REN	P00797	406 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	LGALS2	P05162	132 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	STAG3L3	P0CL85	134 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	OR8G3P	P0DMU2	310 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	LAMP1	P11279	417 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	GCFC2	P16383	781 aa	Known RBP	4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	CCT6A	P40227	531 aa	Known RBP	4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	STAR	P49675	285 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	RUSC1-AS1	Q66K80	236 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	ANGPTL8	Q6UXH0	198 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	C9orf40	Q8IXQ3	194 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	ABHD12	Q8N2K0	398 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	OR6T1	Q8NGN1	323 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	FAM81A	Q8TBF8	368 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	TFB1M	Q8WVM0	346 aa	Known RBP	4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	ITLN1	Q8WWA0	313 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	PSMG2	Q969U7	264 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	PPP1R16A	Q96I34	528 aa		4.87	□□□□□ -1.63
ITFG1-205	ENST00000563350	MS4A14	Q96JA4	679 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms