RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 FABP5Q01469 135 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 MXD1Q05195 221 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 RUNX1T1Q06455 604 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 KLHL12Q53G59 568 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 PRAMEF17Q5VTA0 474 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 FNDC7Q5VTL7 733 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 FCRLBQ6BAA4 426 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 ARHGAP11AQ6P4F7 1023 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 KMT5CQ86Y97 462 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 SLITRK4Q8IW52 837 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 GPR135Q8IZ08 494 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 ACBD7Q8N6N7 88 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 ZNF527Q8NB42 609 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 FAM83FQ8NEG4 500 aaPredicted RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 SGTBQ96EQ0 304 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 CDX2Q99626 313 aaPredicted RBP9.01□□□□□ -0.97
SMG1-205ENST00000561947 TM9SF2Q99805 663 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 OR8D2Q9GZM6 311 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 RERGLQ9H628 205 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 UBQLN4Q9NRR5 601 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 GSTK1Q9Y2Q3 226 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 USP34Q70CQ2 3546 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 UNC13CQ8NB66 2214 aa9.01□□□□□ -0.97
SMG1-205ENST00000561947 FRG2CA6NGY1 282 aa9□□□□□ -0.97
SMG1-205ENST00000561947 LOC110117498-PIK3R3F6TDL0 507 aa9□□□□□ -0.97
SMG1-205ENST00000561947 DDAH2O95865 285 aa9□□□□□ -0.97
SMG1-205ENST00000561947 IGKV3-11P04433 115 aa9□□□□□ -0.97
SMG1-205ENST00000561947 MSL3P1P0C860 447 aa9□□□□□ -0.97
SMG1-205ENST00000561947 PEPDP12955 493 aa9□□□□□ -0.97
SMG1-205ENST00000561947 SLC2A5P22732 501 aa9□□□□□ -0.97
SMG1-205ENST00000561947 TNFSF8P32971 234 aa9□□□□□ -0.97
SMG1-205ENST00000561947 ZP2Q05996 745 aa9□□□□□ -0.97
SMG1-205ENST00000561947 DNASE1L3Q13609 305 aa9□□□□□ -0.97
SMG1-205ENST00000561947 CRMP1Q14194 572 aa9□□□□□ -0.97
SMG1-205ENST00000561947 SHBQ15464 509 aa9□□□□□ -0.97
SMG1-205ENST00000561947 ELAVL1Q15717 326 aaKnown RBP9□□□□□ -0.97
SMG1-205ENST00000561947 STEAP3Q658P3 488 aa9□□□□□ -0.97
SMG1-205ENST00000561947 TMPRSS11AQ6ZMR5 421 aa9□□□□□ -0.97
SMG1-205ENST00000561947 SLC22A16Q86VW1 577 aa9□□□□□ -0.97
SMG1-205ENST00000561947 KLBQ86Z14 1044 aa9□□□□□ -0.97
SMG1-205ENST00000561947 TMEM99Q8N816 258 aa9□□□□□ -0.97
SMG1-205ENST00000561947 GATSQ8NAP1 163 aa9□□□□□ -0.97
SMG1-205ENST00000561947 SLC2A12Q8TD20 617 aa9□□□□□ -0.97
SMG1-205ENST00000561947 ZNF721Q8TF20 911 aa9□□□□□ -0.97
SMG1-205ENST00000561947 C3orf49Q96BT1 292 aa9□□□□□ -0.97
SMG1-205ENST00000561947 SLC30A2Q9BRI3 323 aa9□□□□□ -0.97
SMG1-205ENST00000561947 NXF5Q9H1B4 397 aaKnown RBP9□□□□□ -0.97
SMG1-205ENST00000561947 ZNF304Q9HCX3 659 aa9□□□□□ -0.97
SMG1-205ENST00000561947 POLE4Q9NR33 117 aa9□□□□□ -0.97
SMG1-205ENST00000561947 INPP5EQ9NRR6 644 aa9□□□□□ -0.97
SMG1-205ENST00000561947 PCDHGB6Q9Y5F9 930 aa9□□□□□ -0.97
SMG1-205ENST00000561947 CLCA3PQ9Y6N3 262 aa9□□□□□ -0.97
SMG1-205ENST00000561947 ASXL3Q9C0F0 2248 aa9□□□□□ -0.97
SMG1-205ENST00000561947 TCRBV16S1A1N1A0A5B0 115 aa9□□□□□ -0.97
SMG1-205ENST00000561947 PPM1BO75688 479 aa9□□□□□ -0.97
SMG1-205ENST00000561947 NDUFB2O95178 105 aa9□□□□□ -0.97
SMG1-205ENST00000561947 IFNGP01579 166 aa9□□□□□ -0.97
SMG1-205ENST00000561947 HNRNPCP07910 306 aaKnown RBP eCLIP9□□□□□ -0.97
SMG1-205ENST00000561947 CLEC2LP0C7M8 214 aa9□□□□□ -0.97
SMG1-205ENST00000561947 FOSL2P15408 326 aa9□□□□□ -0.97
SMG1-205ENST00000561947 GTF2E2P29084 291 aaKnown RBP9□□□□□ -0.97
SMG1-205ENST00000561947 NOS3P29474 1203 aa9□□□□□ -0.97
SMG1-205ENST00000561947 SLC9A3P48764 834 aa9□□□□□ -0.97
SMG1-205ENST00000561947 RPS7P62081 194 aaKnown RBP9□□□□□ -0.97
SMG1-205ENST00000561947 BDH1Q02338 343 aa9□□□□□ -0.97
SMG1-205ENST00000561947 CSTF1Q05048 431 aaKnown RBP9□□□□□ -0.97
SMG1-205ENST00000561947 WDR74Q6RFH5 385 aaPredicted RBP9□□□□□ -0.97
SMG1-205ENST00000561947 C7orf57Q8NEG2 295 aa9□□□□□ -0.97
SMG1-205ENST00000561947 ATP6V1C2Q8NEY4 427 aa9□□□□□ -0.97
SMG1-205ENST00000561947 LCORQ96JN0 433 aaPredicted RBP9□□□□□ -0.97
SMG1-205ENST00000561947 TEAD3Q99594 435 aa9□□□□□ -0.97
SMG1-205ENST00000561947 COQ7Q99807 217 aa9□□□□□ -0.97
SMG1-205ENST00000561947 ALG8Q9BVK2 526 aa9□□□□□ -0.97
SMG1-205ENST00000561947 OR51V1Q9H2C8 321 aa9□□□□□ -0.97
SMG1-205ENST00000561947 TPK1Q9H3S4 243 aa9□□□□□ -0.97
SMG1-205ENST00000561947 SERTAD3Q9UJW9 196 aa9□□□□□ -0.97
SMG1-205ENST00000561947 SIT1Q9Y3P8 196 aa9□□□□□ -0.97
SMG1-205ENST00000561947 FER1L5A0AVI2 2057 aa9□□□□□ -0.97
SMG1-205ENST00000561947 SCDO00767 359 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 RGS5O15539 181 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 SNX4O95219 450 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 UTS2O95399 124 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 UBL4AP11441 157 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 HPGDP15428 266 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 CELP19835 753 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 SDC2P34741 201 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 TGM4P49221 684 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 EFNA3P52797 238 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 PSPHP78330 225 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 HNRNPA0Q13151 305 aaKnown RBP8.99□□□□□ -0.97
SMG1-205ENST00000561947 SKP2Q13309 424 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 CD226Q15762 336 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 TBC1D25Q3MII6 688 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 ARHGAP40Q5TG30 622 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 YOD1Q5VVQ6 348 aaPredicted RBP8.99□□□□□ -0.97
SMG1-205ENST00000561947 ARIH2OSQ8N7S6 290 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 SYT14Q8NB59 555 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 OR10H4Q8NGA5 316 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 ASB15Q8WXK1 588 aa8.99□□□□□ -0.97
SMG1-205ENST00000561947 ADIPOR1Q96A54 375 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms