RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 IGF2P01344 180 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 PRKAR1AP10644 381 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 CNR1P21554 472 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 FPR3P25089 353 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 FKBP2P26885 142 aaKnown RBP9.38□□□□□ -0.91
USP3-219ENST00000561326 POU1F1P28069 291 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 TACR3P29371 465 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 POLR2IP36954 125 aaKnown RBP9.38□□□□□ -0.91
USP3-219ENST00000561326 PTGDSP41222 190 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 APOBEC1P41238 236 aaKnown RBP9.38□□□□□ -0.91
USP3-219ENST00000561326 OMPP47874 163 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 GSSP48637 474 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 MASP1P48740 699 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 CHN2P52757 468 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 CDC42P60953 191 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 PTGES3Q15185 160 aaKnown RBP9.38□□□□□ -0.91
USP3-219ENST00000561326 C5orf46Q6UWT4 87 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 ISLR2Q6UXK2 745 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 RASSF6Q6ZTQ3 369 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 USP51Q70EK9 711 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 ATG4DQ86TL0 474 aaPredicted RBP9.38□□□□□ -0.91
USP3-219ENST00000561326 PLCZ1Q86YW0 608 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 CHERPQ8IWX8 916 aaKnown RBP9.38□□□□□ -0.91
USP3-219ENST00000561326 BEST3Q8N1M1 668 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 DEPDC4Q8N2C3 294 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 OR1J4Q8NGS1 313 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 TEX47Q8TBZ9 253 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 FAM46AQ96IP4 442 aaKnown RBP9.38□□□□□ -0.91
USP3-219ENST00000561326 ZNF570Q96NI8 536 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 MUS81Q96NY9 551 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 ZNF426Q9BUY5 554 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 YTHDF1Q9BYJ9 559 aaKnown RBP9.38□□□□□ -0.91
USP3-219ENST00000561326 DSN1Q9H410 356 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 SERINC1Q9NRX5 453 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 PNPLA3Q9NST1 481 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 LRFN1Q9P244 771 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 REV1Q9UBZ9 1251 aa9.38□□□□□ -0.91
USP3-219ENST00000561326 NDRG4Q9ULP0 352 aaKnown RBP9.38□□□□□ -0.91
USP3-219ENST00000561326 A0A087WZY1 265 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 TMED7-TICAM2A0A0A6YYA0 188 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 MAGEA13PA6NCF6 341 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 A6NL46 340 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 EFCAB9A8MZ26 197 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 GNB5O14775 395 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 KLK10O43240 276 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 MPZL2O60487 215 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 HCN1O60741 890 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 CBR3O75828 277 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 HIST1H2ABP04908 130 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 GNAO1P09471 354 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 CCL3P10147 92 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 SAGP10523 405 aaPredicted RBP9.37□□□□□ -0.91
USP3-219ENST00000561326 BMP7P18075 431 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 CHMP24386 653 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 GGT2P36268 569 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 CD96P40200 585 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 EIF1P41567 113 aaKnown RBP9.37□□□□□ -0.91
USP3-219ENST00000561326 GIPRP48546 466 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 SLC9A3P48764 834 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 NUP107P57740 925 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 CSNK2BP67870 215 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 CDC20Q12834 499 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.37□□□□□ -0.91
USP3-219ENST00000561326 PRAMEF20Q5VT98 475 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 ZNF691Q5VV52 312 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 BICRALQ6AI39 1079 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 CASP12Q6UXS9 341 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 WDR88Q6ZMY6 472 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 HIST3H2AQ7L7L0 130 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 OAFQ86UD1 273 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 SLC43A2Q8N370 569 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 C10orf53Q8N6V4 93 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 CLDN22Q8N7P3 220 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 OR2M3Q8NG83 312 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 HIST1H2ACQ93077 130 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 SGTBQ96EQ0 304 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 TMEM41AQ96HV5 264 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 MRGPRX4Q96LA9 322 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 PITX2Q99697 317 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 PRRG3Q9BZD7 231 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 NDEL1Q9GZM8 345 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 SH2D2AQ9NP31 389 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 MEPEQ9NQ76 525 aaPredicted RBP9.37□□□□□ -0.91
USP3-219ENST00000561326 IMPAD1Q9NX62 359 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 OSGIN1Q9UJX0 560 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 TMED7Q9Y3B3 224 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 ACACAQ13085 2346 aa9.37□□□□□ -0.91
USP3-219ENST00000561326 URB1O60287 2271 aaKnown RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 ZAR1LA6NP61 321 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 A8MVM7 634 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 KPNA4O00629 521 aaPredicted RBP9.36□□□□□ -0.91
USP3-219ENST00000561326 OR2T1O43869 369 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 PIP5K1CO60331 668 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 TNFAIP8O95379 198 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 HMGN1P05114 100 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 PRKCAP17252 672 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 ADH6P28332 368 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 GPR4P46093 362 aa9.36□□□□□ -0.91
USP3-219ENST00000561326 ST13P50502 369 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms