RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TMEM72A0PK05 275 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 ZC3H12DA2A288 527 aaKnown RBP12.44□□□□□ -0.42
TPM1-230ENST00000561266 EVPLLA8MZ36 301 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 TPST2O60704 377 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 THBS1P07996 1170 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 COX4I1P13073 169 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 CCNA2P20248 432 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 ADSLP30566 484 aaPredicted RBP12.44□□□□□ -0.42
TPM1-230ENST00000561266 PCBP3P57721 371 aaKnown RBP12.44□□□□□ -0.42
TPM1-230ENST00000561266 SELENBP1Q13228 472 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 CYLC2Q14093 348 aaPredicted RBP12.44□□□□□ -0.42
TPM1-230ENST00000561266 SF3B4Q15427 424 aaKnown RBP eCLIP12.44□□□□□ -0.421e-9■■□□□ 12.9
TPM1-230ENST00000561266 SGCBQ16585 318 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 SLC25A35Q3KQZ1 300 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 LIN52Q52LA3 116 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 ZNF311Q5JNZ3 666 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 RNF220Q5VTB9 566 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 ESPNLQ6ZVH7 1005 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 CHMP1BQ7LBR1 199 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 P4HA3Q7Z4N8 544 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 BTLAQ7Z6A9 289 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 CALHM3Q86XJ0 350 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 ZNF563Q8TA94 476 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 BBS10Q8TAM1 723 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 MARVELD3Q96A59 401 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 STARD4Q96DR4 205 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 ARL5BQ96KC2 179 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 OR11A1Q9GZK7 315 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 ZNF629Q9UEG4 869 aaPredicted RBP12.44□□□□□ -0.42
TPM1-230ENST00000561266 ZNF175Q9Y473 711 aa12.44□□□□□ -0.42
TPM1-230ENST00000561266 CFAP73A6NFT4 308 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 C5orf58C9J3I9 102 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 DVL2O14641 736 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 IL18BPO95998 194 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 CGAP01215 116 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 OPN1SWP03999 348 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 ETS2P15036 469 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 ENPP1P22413 925 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 TACR3P29371 465 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 CARD18P57730 90 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 EEFSECP57772 596 aaKnown RBP12.43□□□□□ -0.42
TPM1-230ENST00000561266 RPS3AP61247 264 aaKnown RBP12.43□□□□□ -0.42
TPM1-230ENST00000561266 SIRPAP78324 504 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 ZNF239Q16600 458 aaKnown RBP12.43□□□□□ -0.42
TPM1-230ENST00000561266 COQ5Q5HYK3 327 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 PPP4R4Q6NUP7 873 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 MEX3BQ6ZN04 569 aaKnown RBP12.43□□□□□ -0.42
TPM1-230ENST00000561266 PIGWQ7Z7B1 504 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 GPR32P1Q8NGA4 272 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 ZNF583Q96ND8 569 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 ADAM19Q9H013 955 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 CHST11Q9NPF2 352 aa12.43□□□□□ -0.42
TPM1-230ENST00000561266 ING1Q9UK53 422 aaPredicted RBP12.43□□□□□ -0.42
TPM1-230ENST00000561266 TMED7-TICAM2A0A0A6YYA0 188 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 TMEM247A6NEH6 219 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 CCT8L1PA6NM43 557 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 BBIP1A8MTZ0 92 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 ZNF814B7Z6K7 855 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 SYT5O00445 386 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 FAAHO00519 579 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 SLC22A2O15244 555 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 MFN2O95140 757 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 ME2P23368 584 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 SLC6A2P23975 617 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 HTR2AP28223 471 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 BNIP2Q12982 314 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 GNA13Q14344 377 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 LARS2Q15031 903 aaKnown RBP12.42□□□□□ -0.42
TPM1-230ENST00000561266 DUSP7Q16829 419 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 CYP51A1Q16850 503 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 FBXL19-AS1Q494R0 122 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 MMEL1Q495T6 779 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 DHRS4L2Q6PKH6 230 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 ZNF474Q6S9Z5 364 aaPredicted RBP12.42□□□□□ -0.42
TPM1-230ENST00000561266 GRINAQ7Z429 371 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 CPLX4Q7Z7G2 160 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 LUZP2Q86TE4 346 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 DMRTC2Q8IXT2 367 aaPredicted RBP12.42□□□□□ -0.42
TPM1-230ENST00000561266 SMYD1Q8NB12 490 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 HIPK4Q8NE63 616 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 OR4D11Q8NGI4 311 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 RP9Q8TA86 221 aaKnown RBP12.42□□□□□ -0.42
TPM1-230ENST00000561266 ABHD3Q8WU67 409 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 TMEM234Q8WY98 164 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 OR5B2Q96R09 309 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 GPATCH1Q9BRR8 931 aaKnown RBP12.42□□□□□ -0.42
TPM1-230ENST00000561266 SFXN3Q9BWM7 321 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 OPN3Q9H1Y3 402 aaPredicted RBP12.42□□□□□ -0.42
TPM1-230ENST00000561266 CMTM6Q9NX76 183 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 ZNF232Q9UNY5 417 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 CORO2BQ9UQ03 480 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 IFT52Q9Y366 437 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 TMED7Q9Y3B3 224 aa12.42□□□□□ -0.42
TPM1-230ENST00000561266 ABCA12Q86UK0 2595 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 TMEM229AB2RXF0 380 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 EEF1E1-BLOC1S5C9J1V9 151 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 M0QX08 132 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 AIM2O14862 343 aa12.41□□□□□ -0.42
TPM1-230ENST00000561266 SMAD9O15198 467 aaKnown RBP12.41□□□□□ -0.42
TPM1-230ENST00000561266 EEF1E1O43324 174 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms