RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	RNF139	Q8WU17	664 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	CDKL2	Q92772	493 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	PINX1	Q96BK5	328 aa	Known RBP	4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	HPDL	Q96IR7	371 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	ELMO2	Q96JJ3	720 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	FOXN4	Q96NZ1	517 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	RHOXF2	Q9BQY4	288 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	SPZ1	Q9BXG8	430 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	POLR1E	Q9GZS1	481 aa	Known RBP	4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	GPN2	Q9H9Y4	310 aa	Predicted RBP	4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	LPAR2	Q9HBW0	351 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	FAM120C	Q9NX05	1096 aa	Known RBP	4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	NTNG1	Q9Y2I2	539 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	MFHAS1	Q9Y4C4	1052 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	MUC3A	Q02505	3323 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	GAK	O14976	1311 aa		4.17	□□□□□ -1.74
TCF12-223	ENST00000561235	NRXN2	Q9P2S2	1712 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	IGKV3D-20	A0A0C4DH25	116 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	WASHC1	A8K0Z3	465 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	EFCAB7	A8K855	629 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	CXCL11	O14625	94 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	POLR3G	O15318	223 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	MAGEB3	O15480	346 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	PPIH	O43447	177 aa	Known RBP	4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	ADCY5	O95622	1261 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	THRB	P10828	461 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	AXL	P30530	894 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	GDI1	P31150	447 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	GCK	P35557	465 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	DLST	P36957	453 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	OR1D4	P47884	311 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	METAP1	P53582	386 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	BASP1	P80723	227 aa	Known RBP	4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	BEX3	Q00994	111 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	IL18R1	Q13478	541 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	CUL2	Q13617	745 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	MXD4	Q14582	209 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	IMMT	Q16891	758 aa	Known RBP	4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	SULT1C3	Q6IMI6	304 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	NIPAL3	Q6P499	406 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	SYT10	Q6XYQ8	523 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	ZNF573	Q86YE8	665 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	HPS6	Q86YV9	775 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	LRRC43	Q8N309	656 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	DEFB123	Q8N688	67 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	TYMSOS	Q8TAI1	123 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	ANKRD49	Q8WVL7	239 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	UPRT	Q96BW1	309 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	C9orf85	Q96MD7	179 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	ALS2CR12	Q96Q35	445 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	VPS35	Q96QK1	796 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	APOL2	Q9BQE5	337 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	AGPAT5	Q9NUQ2	364 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	PTBP2	Q9UKA9	531 aa	Known RBP	4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	CHMP2B	Q9UQN3	213 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	MRPS7	Q9Y2R9	242 aa	Known RBP	4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	ASB3	Q9Y575	518 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	LTN1	O94822	1766 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	PKD1L2	Q7Z442	2459 aa		4.16	□□□□□ -1.74
TCF12-223	ENST00000561235	GON4L	Q3T8J9	2241 aa		4.15	□□□□□ -1.74
TCF12-223	ENST00000561235	LAMA2	P24043	3122 aa	Known RBP	4.15	□□□□□ -1.74
TCF12-223	ENST00000561235	TRBV7-9	A0A0J9YWB2	115 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	TRIM49B	A6NDI0	452 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	TM9SF1	O15321	606 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	BIRC5	O15392	142 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	NUDT21	O43809	227 aa	Known RBP	4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	LCMT2	O60294	686 aa	Known RBP	4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	RHOBTB1	O94844	696 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	PRAMEF12	O95522	483 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	JCHAIN	P01591	159 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	S100A6	P06703	90 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	CALCB	P10092	127 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	UMPS	P11172	480 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	LAMP1	P11279	417 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	SDC1	P18827	310 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	POLR2E	P19388	210 aa	Known RBP	4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	IGFBP5	P24593	272 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	U2AF2	P26368	475 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	RFC4	P35249	363 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	ATP5O	P48047	213 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	DR1	Q01658	176 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	PLOD1	Q02809	727 aa	Predicted RBP	4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	PAX2	Q02962	417 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	GBE1	Q04446	702 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	C15orf32	Q32M92	178 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	TIMM50	Q3ZCQ8	353 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	CAVIN4	Q5BKX8	364 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	TPGS2	Q68CL5	300 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	THOC7	Q6I9Y2	204 aa	Known RBP	4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	ASPHD2	Q6ICH7	369 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	ZNF774	Q6NX45	483 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	C8orf74	Q6P047	294 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	ZYG11A	Q6WRX3	759 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	ARMCX2	Q7L311	632 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	NLRP9	Q7RTR0	991 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	PARG	Q86W56	976 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	CDC20B	Q86Y33	519 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	GRAMD2A	Q8IUY3	354 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	RHOXF1	Q8NHV9	184 aa		4.15	□□□□□ -1.75
TCF12-223	ENST00000561235	CGREF1	Q99674	301 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms