RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 MARVELD2Q8N4S9 558 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 MEIOBQ8N635 442 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 OR5M9Q8NGP3 310 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 OR5M1Q8NGP8 315 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 MBD3L2Q8NHZ7 208 aaPredicted RBP8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF563Q8TA94 476 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 SLC25A43Q8WUT9 341 aaPredicted RBP8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 ARHGDIGQ99819 225 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 TUBA1CQ9BQE3 449 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 TTYH2Q9BSA4 534 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 PCDHAC1Q9H158 963 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 C12orf10Q9HB07 376 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 KLHL28Q9NXS3 571 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 TAS2R1Q9NYW7 299 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 TESQ9UGI8 421 aaKnown RBP8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 CAMK2AQ9UQM7 478 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 ICE1Q9Y2F5 2266 aa8.67□□□□□ -1.02
RABGGTA-221ENST00000561055 A0A0J9YW62 118 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 GJE1A6NN92 205 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 CYSRT1A8MQ03 144 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 CXCR6O00574 342 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF208O43345 1280 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 TPST2O60704 377 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 UBOX5O94941 541 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 FESP07332 822 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 GLI4P10075 376 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 GGT1P19440 569 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 IL11P20809 199 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 ME2P23368 584 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 CEACAM8P31997 349 aaPredicted RBP8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 RYKP34925 604 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 POLR2HP52434 150 aaKnown RBP8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 CLDN20P56880 219 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 COPZ1P61923 177 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 MERTKQ12866 999 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 SAMD4BQ5PRF9 694 aaKnown RBP8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 RIPPLY2Q5TAB7 128 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 RPTNQ6XPR3 784 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 SEM1Q6ZVN7 128 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 DEFB107AQ8IZN7 70 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 SMYD1Q8NB12 490 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 RBM15BQ8NDT2 890 aaKnown RBP8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 OR52E4Q8NGH9 312 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 SLC26A7Q8TE54 656 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 WNT2BQ93097 391 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 CCDC120Q96HB5 630 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 ZFP3Q96NJ6 502 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 CDRT15Q96T59 188 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 KCTD14Q9BQ13 255 aaPredicted RBP8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 WFDC6Q9BQY6 131 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF559Q9BR84 538 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 TRIM2Q9C040 744 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 GORASP2Q9H8Y8 452 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 CTPS2Q9NRF8 586 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 SERINC1Q9NRX5 453 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 ADA2Q9NZK5 511 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 GMPR2Q9P2T1 348 aaKnown RBP8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 CLCF1Q9UBD9 225 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 OSGIN1Q9UJX0 560 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 BAG5Q9UL15 447 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 PRPF19Q9UMS4 504 aaKnown RBP8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF175Q9Y473 711 aa8.66□□□□□ -1.02
RABGGTA-221ENST00000561055 COL12A1Q99715 3063 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 TMED7-TICAM2A0A0A6YYA0 188 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 CLCA1A8K7I4 914 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 H0Y3Z8 333 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 FRS3O43559 492 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 TOXO94900 526 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 AGFG2O95081 481 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 RCBTB2O95199 551 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 OPN1SWP03999 348 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 TCEA1P23193 301 aaKnown RBP8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 SHC1P29353 583 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 TACR3P29371 465 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 NUP107P57740 925 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 RPS3AP61247 264 aaKnown RBP8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 MXRA7P84157 204 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 ADORA2A-AS1P86434 159 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 BNIP1Q12981 228 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 CEACAM7Q14002 265 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 CYBRD1Q53TN4 286 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 SYT14P1Q58G82 188 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 PDSS1Q5T2R2 415 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 SWT1Q5T5J6 900 aaKnown RBP8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 GLYATQ6IB77 296 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 XKRXQ6PP77 449 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 C3P1Q6ZMU1 363 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 RINLQ6ZS11 566 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 CBLL1Q75N03 491 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 ATG4DQ86TL0 474 aaPredicted RBP8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 RPRMLQ8N4K4 120 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF808Q8N4W9 903 aaPredicted RBP8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 OR4D11Q8NGI4 311 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 OR6T1Q8NGN1 323 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 OR2V1Q8NHB1 315 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 SSC4DQ8WTU2 575 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 DNAJA4Q8WW22 397 aaPredicted RBP8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 ITLN2Q8WWU7 325 aaPredicted RBP8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 RND1Q92730 232 aa8.65□□□□□ -1.02
RABGGTA-221ENST00000561055 SLC38A4Q969I6 547 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms