RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 KIRREL3Q8IZU9 778 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 ZNF619Q8N2I2 560 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 FAM71CQ8NEG0 241 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 ZNF775Q96BV0 537 aaPredicted RBP14.37□□□□□ -0.11
SNX1-213ENST00000561026 ROPN1LQ96C74 230 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 ZG16BQ96DA0 208 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 NEURL3Q96EH8 262 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 ZNF300Q96RE9 604 aaPredicted RBP14.37□□□□□ -0.11
SNX1-213ENST00000561026 PARD6BQ9BYG5 372 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 POTEKPQ9BYX7 375 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 NUF2Q9BZD4 464 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 PRSS50Q9UI38 385 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 LAMP3Q9UQV4 416 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 SLC35A3Q9Y2D2 325 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 HIVEP2P31629 2446 aa14.37□□□□□ -0.11
SNX1-213ENST00000561026 SULT2B1O00204 365 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 CLOCKO15516 846 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 CD3EP07766 207 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 BGNP21810 368 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 APOBEC1P41238 236 aaKnown RBP14.36□□□□□ -0.11
SNX1-213ENST00000561026 CLNS1AP54105 237 aaKnown RBP14.36□□□□□ -0.11
SNX1-213ENST00000561026 CSNK2A1P68400 391 aaPredicted RBP14.36□□□□□ -0.11
SNX1-213ENST00000561026 FUT5Q11128 374 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 STX3Q13277 289 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 DPY19L1Q2PZI1 675 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 TNFAIP8L3Q5GJ75 292 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 SEZ6L2Q6UXD5 910 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 BHLHA15Q7RTS1 189 aaPredicted RBP14.36□□□□□ -0.11
SNX1-213ENST00000561026 ATG4DQ86TL0 474 aaPredicted RBP14.36□□□□□ -0.11
SNX1-213ENST00000561026 PIWIL2Q8TC59 973 aaKnown RBP14.36□□□□□ -0.11
SNX1-213ENST00000561026 SLC25A43Q8WUT9 341 aaPredicted RBP14.36□□□□□ -0.11
SNX1-213ENST00000561026 CCDC106Q9BWC9 280 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 MEAF6Q9HAF1 191 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 CADP27708 2225 aa14.36□□□□□ -0.11
SNX1-213ENST00000561026 E9PBE3 544 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 OVOL3O00110 214 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 FESP07332 822 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 EDNRAP25101 427 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 S100A3P33764 101 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 CHI3L1P36222 383 aaPredicted RBP14.35□□□□□ -0.11
SNX1-213ENST00000561026 RPS4XP62701 263 aaKnown RBP14.35□□□□□ -0.11
SNX1-213ENST00000561026 KCNJ10P78508 379 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 FAM174BQ3ZCQ3 159 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 OGFOD2Q6N063 350 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 FRRS1Q6ZNA5 592 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 GALNT5Q7Z7M9 940 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 MTDHQ86UE4 582 aaKnown RBP14.35□□□□□ -0.11
SNX1-213ENST00000561026 ZNF563Q8TA94 476 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 FBXW5Q969U6 566 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 SLC35A5Q9BS91 424 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 PNPOQ9NVS9 261 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 MARCOQ9UEW3 520 aaPredicted RBP14.35□□□□□ -0.11
SNX1-213ENST00000561026 CHRNA9Q9UGM1 479 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 BTNL2Q9UIR0 455 aa14.35□□□□□ -0.11
SNX1-213ENST00000561026 IGKV3D-15A0A087WSY6 115 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 PRAMEF27A3QJZ7 478 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 DPRXA6NFQ7 191 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 LYZL6O75951 148 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 C1QCP02747 245 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 SOD3P08294 240 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 DANCRP0C864 163 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 TFPIP10646 304 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 IGHV1-2P23083 117 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 FKBP2P26885 142 aaKnown RBP14.34□□□□□ -0.11
SNX1-213ENST00000561026 RYKP34925 604 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 KHKP50053 298 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 CHRNEQ04844 493 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 BSPH1Q075Z2 132 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 PDK3Q15120 406 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 ZNF672Q499Z4 452 aaPredicted RBP14.34□□□□□ -0.11
SNX1-213ENST00000561026 GPAT3Q53EU6 434 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 DNAJC14Q6Y2X3 702 aaPredicted RBP14.34□□□□□ -0.11
SNX1-213ENST00000561026 GRINAQ7Z429 371 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 HMGN2P46Q86SG4 172 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 ZNF100Q8IYN0 542 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 SMAP2Q8WU79 429 aaPredicted RBP14.34□□□□□ -0.11
SNX1-213ENST00000561026 NEUROG1Q92886 237 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 TEX37Q96LM6 180 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 CCDC115Q96NT0 180 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 CENPHQ9H3R5 247 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 KCNK9Q9NPC2 374 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 EXOSC3Q9NQT5 275 aaKnown RBP14.34□□□□□ -0.11
SNX1-213ENST00000561026 CTPS2Q9NRF8 586 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.34□□□□□ -0.11
SNX1-213ENST00000561026 SPIN1Q9Y657 262 aaPredicted RBP14.34□□□□□ -0.11
SNX1-213ENST00000561026 CLDN24A6NM45 220 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 HMGN4O00479 90 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 ADAM11O75078 769 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 PMS2P2O95744 297 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 COX5AP20674 150 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 UFM1P61960 85 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 HPCAP84074 193 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 PLAURQ03405 335 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 BST1Q10588 318 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 PPA1Q15181 289 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 STK11Q15831 433 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 TIMM23BQ5SRD1 257 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 CEP85LQ5SZL2 805 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 ABLIM2Q6H8Q1 611 aa14.34□□□□□ -0.11
SNX1-213ENST00000561026 SSX8Q7RTT4 187 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms