RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 RINLQ6ZS11 566 aa13.95□□□□□ -0.18
LYSMD2-204ENST00000560491 LACC1Q8IV20 430 aa13.95□□□□□ -0.18
LYSMD2-204ENST00000560491 DEFB107AQ8IZN7 70 aa13.95□□□□□ -0.18
LYSMD2-204ENST00000560491 FAM156AQ8NDB6 213 aa13.95□□□□□ -0.18
LYSMD2-204ENST00000560491 RBM15BQ8NDT2 890 aaKnown RBP13.95□□□□□ -0.18
LYSMD2-204ENST00000560491 ADGRG7Q96K78 797 aa13.95□□□□□ -0.18
LYSMD2-204ENST00000560491 KLHL15Q96M94 604 aa13.95□□□□□ -0.18
LYSMD2-204ENST00000560491 DOCK7Q96N67 2140 aa13.95□□□□□ -0.18
LYSMD2-204ENST00000560491 ARHGDIGQ99819 225 aa13.95□□□□□ -0.18
LYSMD2-204ENST00000560491 PRR14Q9BWN1 585 aa13.95□□□□□ -0.18
LYSMD2-204ENST00000560491 USP9XQ93008 2570 aaPredicted RBP13.95□□□□□ -0.18
LYSMD2-204ENST00000560491 A0A0G2JNJ9 132 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 WIPF3A6NGB9 483 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 CD8B2A6NJW9 211 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 CXCR6O00574 342 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 TOXO94900 526 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 UBOX5O94941 541 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 LGI1O95970 557 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 FESP07332 822 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 HOXD4P09016 255 aaPredicted RBP13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 NCK1P16333 377 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 CALB2P22676 271 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 KDELR2P33947 212 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 SLC1A3P43003 542 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 POLR2HP52434 150 aaKnown RBP13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 RPS3AP61247 264 aaKnown RBP13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 COPZ1P61923 177 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 TMEM176BQ3YBM2 270 aaPredicted RBP13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 NSUN5P2Q63ZY6 315 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 WBP2NLQ6ICG8 309 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 C3orf33Q6P1S2 294 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 C16orf89Q6UX73 402 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 ESPNLQ6ZVH7 1005 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 ADGRE4PQ86SQ3 457 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 ADGRG3Q86Y34 549 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 CCDC71Q8IV32 467 aaPredicted RBP13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 C9orf106Q8NAJ2 232 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 BHLHE22Q8NFJ8 381 aaPredicted RBP13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 TNIP2Q8NFZ5 429 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 OR4D11Q8NGI4 311 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 OR10Q1Q8NGQ4 319 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 OR10D3Q8NH80 312 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 OR2V1Q8NHB1 315 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 VANGL1Q8TAA9 524 aaPredicted RBP13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 FIG4Q92562 907 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 SLC35B4Q969S0 331 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 DNAJA3Q96EY1 480 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 CDRT15Q96T59 188 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 COQ10BQ9H8M1 238 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 KLHL28Q9NXS3 571 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 CLCF1Q9UBD9 225 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 STOML1Q9UBI4 398 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 Q9UFV3 132 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 CHRNA9Q9UGM1 479 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 EGFL7Q9UHF1 273 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 OSGIN1Q9UJX0 560 aa13.94□□□□□ -0.18
LYSMD2-204ENST00000560491 TMED7-TICAM2A0A0A6YYA0 188 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 A0A1W2PNR3 127 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 TMEM229AB2RXF0 380 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 SYT5O00445 386 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 GSTA4O15217 222 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 CXCL13O43927 109 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 TPST2O60704 377 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 TGM6O95932 706 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 TCN1P20061 433 aaPredicted RBP13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 TNFRSF1BP20333 461 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 APOBEC1P41238 236 aaKnown RBP13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 MNAT1P51948 309 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 NCALDP61601 193 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 PON3Q15166 354 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 SF3B4Q15427 424 aaKnown RBP eCLIP13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 CDSNQ15517 529 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 SGCBQ16585 318 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 NRF1Q16656 503 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 CYBRD1Q53TN4 286 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 HBMQ6B0K9 141 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 PPP4R4Q6NUP7 873 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 CHMP1BQ7LBR1 199 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 MRGPRGQ86SM5 289 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 RBM45Q8IUH3 476 aaKnown RBP13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 NAXEQ8NCW5 288 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 OR52E4Q8NGH9 312 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 OR6T1Q8NGN1 323 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 ITLN2Q8WWU7 325 aaPredicted RBP13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 RND1Q92730 232 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 OR11A1Q9GZK7 315 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 ADAM19Q9H013 955 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 CALHM2Q9HA72 323 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 SERINC1Q9NRX5 453 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 NDE1Q9NXR1 346 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 RNF6Q9Y252 685 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 TMED7Q9Y3B3 224 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 PCNX1Q96RV3 2341 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 MED12LQ86YW9 2145 aa13.93□□□□□ -0.18
LYSMD2-204ENST00000560491 MPDZO75970 2070 aa13.92□□□□□ -0.18
LYSMD2-204ENST00000560491 TMEM72A0PK05 275 aa13.92□□□□□ -0.18
LYSMD2-204ENST00000560491 MBD3L4A6NDZ8 208 aaPredicted RBP13.92□□□□□ -0.18
LYSMD2-204ENST00000560491 MBD3L3A6NE82 208 aaPredicted RBP13.92□□□□□ -0.18
LYSMD2-204ENST00000560491 MBD3L5A6NJ08 208 aaPredicted RBP13.92□□□□□ -0.18
LYSMD2-204ENST00000560491 SLC22A20A6NK97 555 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms