RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 SLC25A53Q5H9E4 307 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 ZNF691Q5VV52 312 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 B3GNTL1Q67FW5 361 aaPredicted RBP7.84□□□□□ -1.15
TRAF3-209ENST00000560463 WDR88Q6ZMY6 472 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 RASSF6Q6ZTQ3 369 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 PRICKLE2Q7Z3G6 844 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 GRINAQ7Z429 371 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 ATG4DQ86TL0 474 aaPredicted RBP7.84□□□□□ -1.15
TRAF3-209ENST00000560463 VASH2Q86V25 355 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 NRMQ8IXM6 262 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 SLC43A2Q8N370 569 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 CLDN22Q8N7P3 220 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 KCNE4Q8WWG9 221 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 BPIFA2Q96DR5 249 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 TMEM41AQ96HV5 264 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 FAM46AQ96IP4 442 aaKnown RBP7.84□□□□□ -1.15
TRAF3-209ENST00000560463 ZNF570Q96NI8 536 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 PITX2Q99697 317 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 APOL4Q9BPW4 351 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 UTP23Q9BRU9 249 aaKnown RBP7.84□□□□□ -1.15
TRAF3-209ENST00000560463 GALNT9Q9HCQ5 603 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 TIMMDC1Q9NPL8 285 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 PNPLA3Q9NST1 481 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 SACM1LQ9NTJ5 587 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 REV1Q9UBZ9 1251 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 GMPPBQ9Y5P6 360 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 ARHGAP21Q5T5U3 1957 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 APC2O95996 2303 aa7.84□□□□□ -1.15
TRAF3-209ENST00000560463 CEP295Q9C0D2 2601 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 ASPMQ8IZT6 3477 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 A0A087WZY1 265 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 ARGFXA6NJG6 315 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 ZAR1LA6NP61 321 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 MASP2O00187 686 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 SNPHO15079 494 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 KLF4O43474 513 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 MPZL2O60487 215 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 SLC25A12O75746 678 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 TP53P04637 393 aaPredicted RBP7.83□□□□□ -1.16
TRAF3-209ENST00000560463 GNAO1P09471 354 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 CCL3P10147 92 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 IFI30P13284 250 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 MST1P26927 711 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 ADH6P28332 368 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 TACR3P29371 465 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 GGT2P36268 569 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 EIF1P41567 113 aaKnown RBP7.83□□□□□ -1.16
TRAF3-209ENST00000560463 SLC9A3P48764 834 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 TPD52P55327 224 aaPredicted RBP7.83□□□□□ -1.16
TRAF3-209ENST00000560463 NUP107P57740 925 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 CDC42P60953 191 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 CDC20Q12834 499 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 PTGES3Q15185 160 aaKnown RBP7.83□□□□□ -1.16
TRAF3-209ENST00000560463 ANKDD1AQ495B1 522 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 AGAP7PQ5VUJ5 663 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 ISLR2Q6UXK2 745 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 THAP5Q7Z6K1 395 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 PLCZ1Q86YW0 608 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 BEST3Q8N1M1 668 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 DEPDC4Q8N2C3 294 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 FADS6Q8N9I5 356 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 PSD4Q8NDX1 1056 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 OR2M3Q8NG83 312 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 OR1J4Q8NGS1 313 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 SNIP1Q8TAD8 396 aaKnown RBP7.83□□□□□ -1.16
TRAF3-209ENST00000560463 OSTF1Q92882 214 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 GATA6Q92908 595 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 MRGPRX4Q96LA9 322 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 MUS81Q96NY9 551 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 AGAP4Q96P64 663 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 YTHDF1Q9BYJ9 559 aaKnown RBP7.83□□□□□ -1.16
TRAF3-209ENST00000560463 RNF32Q9H0A6 362 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 ING2Q9H160 280 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 DSN1Q9H410 356 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 MEPEQ9NQ76 525 aaPredicted RBP7.83□□□□□ -1.16
TRAF3-209ENST00000560463 WDR70Q9NW82 654 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 IL20Q9NYY1 176 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 MED11Q9P086 117 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 LRFN1Q9P244 771 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 DKK4Q9UBT3 224 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 OSGIN1Q9UJX0 560 aa7.83□□□□□ -1.16
TRAF3-209ENST00000560463 TMED7-TICAM2A0A0A6YYA0 188 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 MAGEA13PA6NCF6 341 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 C2orf72A6NCS6 295 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 UNC119BA6NIH7 251 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 A8MVM7 634 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 EFCAB9A8MZ26 197 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 H3BN98 237 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 NKX2-8O15522 239 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 PIP5K1CO60331 668 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 TRIM3O75382 744 aaPredicted RBP7.82□□□□□ -1.16
TRAF3-209ENST00000560463 CBR3O75828 277 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 RCBTB2O95199 551 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 TNFAIP8O95379 198 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 PRKCAP17252 672 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 BMP7P18075 431 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 CNR1P21554 472 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 CHMP24386 653 aa7.82□□□□□ -1.16
TRAF3-209ENST00000560463 POLR2IP36954 125 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms