RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 PLAURQ03405 335 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 LRRC74AQ0VAA2 488 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 SELENBP1Q13228 472 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 ZNF239Q16600 458 aaKnown RBP13.12□□□□□ -0.31
IDH3A-219ENST00000560414 AP1ARQ63HQ0 302 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 ANKRD34AQ69YU3 496 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 C22orf34Q6ZV56 151 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 FAM71CQ8NEG0 241 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 OR6K3Q8NGY3 331 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 ZFP90Q8TF47 636 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 ABHD3Q8WU67 409 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 VPS33AQ96AX1 596 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 KLHL4Q9C0H6 718 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 SLC38A1Q9H2H9 487 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 C12orf49Q9H741 205 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 ELOVL5Q9NYP7 299 aa13.12□□□□□ -0.31
IDH3A-219ENST00000560414 C6orf203Q9P0P8 240 aaPredicted RBP13.12□□□□□ -0.31
IDH3A-219ENST00000560414 HIVEP1P15822 2718 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 IGHV3-15A0A0B4J1V0 119 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 C16orf97H3BN30 126 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 ADAM11O75078 769 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 ANP32DO95626 131 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
IDH3A-219ENST00000560414 NR2F1P10589 423 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 PGCP20142 388 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 KLK2P20151 261 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 ENPP1P22413 925 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 AGTR1P30556 359 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 SLC7A1P30825 629 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 MVDP53602 400 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 MERTKQ12866 999 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 MAPK11Q15759 364 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 MIER2Q8N344 545 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 ZNF563Q8TA94 476 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 RNF128Q8TEB7 428 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 ST8SIA1Q92185 356 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 CNOT9Q92600 299 aaKnown RBP13.11□□□□□ -0.31
IDH3A-219ENST00000560414 CPNE4Q96A23 557 aaPredicted RBP13.11□□□□□ -0.31
IDH3A-219ENST00000560414 AURKBQ96GD4 344 aaPredicted RBP13.11□□□□□ -0.31
IDH3A-219ENST00000560414 ZC3HAV1LQ96H79 300 aaKnown RBP13.11□□□□□ -0.31
IDH3A-219ENST00000560414 REXO5Q96IC2 774 aaKnown RBP13.11□□□□□ -0.31
IDH3A-219ENST00000560414 TRNT1Q96Q11 434 aaKnown RBP13.11□□□□□ -0.31
IDH3A-219ENST00000560414 OR5B2Q96R09 309 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 EBF4Q9BQW3 602 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 MED18Q9BUE0 208 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 PLEKHF2Q9H8W4 249 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 TIGARQ9NQ88 270 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 GLRX2Q9NS18 164 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.11□□□□□ -0.31
IDH3A-219ENST00000560414 ACER3Q9NUN7 267 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 LIPT1Q9Y234 373 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 SLC35A3Q9Y2D2 325 aa13.11□□□□□ -0.31
IDH3A-219ENST00000560414 PRRC2AP48634 2157 aaKnown RBP13.11□□□□□ -0.31
IDH3A-219ENST00000560414 AGAP5A6NIR3 686 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 KRT75O95678 551 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 ETFAP13804 333 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 CRATP43155 626 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 PCYT1AP49585 367 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 ANXA11P50995 505 aaKnown RBP13.1□□□□□ -0.31
IDH3A-219ENST00000560414 C6orf10Q5SRN2 563 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 GTF2IRD2BQ6EKJ0 949 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 C3orf33Q6P1S2 294 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 LRRC74BQ6ZQY2 392 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 PLEKHM3Q6ZWE6 761 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 FCRLAQ7L513 359 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 HDXQ7Z353 690 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 NUFIP2Q7Z417 695 aaKnown RBP13.1□□□□□ -0.31
IDH3A-219ENST00000560414 GTF2IRD2Q86UP8 949 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 TUSC5Q8IXB3 177 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 DYDC1Q8WWB3 177 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 OIT3Q8WWZ8 545 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 TMEM234Q8WY98 164 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 DNAJA3Q96EY1 480 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 ITCHQ96J02 903 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 RMND5AQ9H871 391 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 TPT1P8Q9HAU6 139 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 TCF7L2Q9NQB0 619 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 CTPS2Q9NRF8 586 aa13.1□□□□□ -0.31
IDH3A-219ENST00000560414 FAM234BA2RU67 622 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 AP3D1O14617 1153 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 POLR3GO15318 223 aaPredicted RBP13.09□□□□□ -0.31
IDH3A-219ENST00000560414 PRKD3O94806 890 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 TGDSO95455 350 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 PABPC4LP0CB38 370 aaKnown RBP13.09□□□□□ -0.31
IDH3A-219ENST00000560414 H2AFXP16104 143 aaPredicted RBP13.09□□□□□ -0.31
IDH3A-219ENST00000560414 AQP5P55064 265 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 RAC3P60763 192 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 TXNL4AP83876 142 aaKnown RBP13.09□□□□□ -0.31
IDH3A-219ENST00000560414 SLC2A7Q6PXP3 512 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 SPNS3Q6ZMD2 512 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 STAC2Q6ZMT1 411 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 ARFGAP2Q8N6H7 521 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 GOLGA6L1Q8N7Z2 621 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 NINJ1Q92982 152 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 CCDC106Q9BWC9 280 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 MTHFD2LQ9H903 347 aaPredicted RBP13.09□□□□□ -0.31
IDH3A-219ENST00000560414 SERINC1Q9NRX5 453 aa13.09□□□□□ -0.31
IDH3A-219ENST00000560414 INTS9Q9NV88 658 aaKnown RBP13.09□□□□□ -0.31
IDH3A-219ENST00000560414 DEFB108AA8MXU0 73 aa13.08□□□□□ -0.32
IDH3A-219ENST00000560414 HMGB1P1B2RPK0 211 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms