RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PRPF18Q99633 342 aaKnown RBP11.55□□□□□ -0.56
TPM1-220ENST00000559556 THUMPD3Q9BV44 507 aaKnown RBP11.55□□□□□ -0.56
TPM1-220ENST00000559556 DUSP26Q9BV47 211 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 MECRQ9BV79 373 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 QRSL1Q9H0R6 528 aaKnown RBP11.55□□□□□ -0.56
TPM1-220ENST00000559556 YAE1D1Q9NRH1 226 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 EMC3Q9P0I2 261 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 B3GALT5Q9Y2C3 310 aa11.55□□□□□ -0.56
TPM1-220ENST00000559556 DUXAA6NLW8 204 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 ZNF716A6NP11 495 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 RNF212BA8MTL3 300 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 A8MV72 311 aaPredicted RBP11.54□□□□□ -0.56
TPM1-220ENST00000559556 C9JVG2 144 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 SULT2B1O00204 365 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 CFLARO15519 480 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 SSX4O60224 188 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 STX11O75558 287 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 UGT2B17O75795 530 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 CSTAP01040 98 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 PGCP20142 388 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 ARRB2P32121 409 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 SOAT1P35610 550 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 SERPINB5P36952 375 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 NUDT6P53370 316 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 RPS26P62854 115 aaKnown RBP11.54□□□□□ -0.56
TPM1-220ENST00000559556 IRX1P78414 480 aaPredicted RBP11.54□□□□□ -0.56
TPM1-220ENST00000559556 MERTKQ12866 999 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 GPR68Q15743 365 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 ARHGAP11BQ3KRB8 267 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 CHRFAM7AQ494W8 412 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 C6orf52Q5T4I8 152 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 IL23RQ5VWK5 629 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 FBXW9Q5XUX1 488 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 TMEM108Q6UXF1 575 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 ZCCHC23Q6ZST2 131 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 TMPPEQ6ZT21 453 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 ZNF100Q8IYN0 542 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 FNDC5Q8NAU1 212 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 OR10H5Q8NGA6 315 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 OIT3Q8WWZ8 545 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 ZNF775Q96BV0 537 aaPredicted RBP11.54□□□□□ -0.56
TPM1-220ENST00000559556 ADAD1Q96M93 576 aaKnown RBP11.54□□□□□ -0.56
TPM1-220ENST00000559556 RHNO1Q9BSD3 238 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 CACNG6Q9BXT2 260 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 ZNF350Q9GZX5 532 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 SERINC1Q9NRX5 453 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 ACER3Q9NUN7 267 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 MALT1Q9UDY8 824 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 MGAT4BQ9UQ53 548 aa11.54□□□□□ -0.56
TPM1-220ENST00000559556 ELOA3DA6NLF2 546 aaPredicted RBP11.53□□□□□ -0.56
TPM1-220ENST00000559556 E7EQL1 145 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 DNPH1O43598 174 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 KIAA0513O60268 411 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 FCMRO60667 390 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 SKAP2O75563 359 aaPredicted RBP11.53□□□□□ -0.56
TPM1-220ENST00000559556 RAD51DO75771 328 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 SLU7O95391 586 aaKnown RBP11.53□□□□□ -0.56
TPM1-220ENST00000559556 PMS2P2O95744 297 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 GUSBP08236 651 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 UBTFL6P0CB48 400 aaPredicted RBP11.53□□□□□ -0.56
TPM1-220ENST00000559556 MATN1P21941 496 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 PTAFRP25105 342 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 TTKP33981 857 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 SLC16A1P53985 500 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 SPOCK1Q08629 439 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 TMEM249Q2WGJ8 235 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 ELOA3BQ3SY89 546 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 CLEC2AQ6UVW9 174 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 EIF3MQ7L2H7 374 aaKnown RBP11.53□□□□□ -0.56
TPM1-220ENST00000559556 MTDHQ86UE4 582 aaKnown RBP11.53□□□□□ -0.56
TPM1-220ENST00000559556 RIBC1Q8N443 379 aaPredicted RBP11.53□□□□□ -0.56
TPM1-220ENST00000559556 ELOA3Q8NG57 546 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 OR2W6PQ8NHA6 318 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 MIPOL1Q8TD10 442 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 SLC35G5Q96KT7 338 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 DHRS9Q9BPW9 319 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 CCDC106Q9BWC9 280 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 CBLN4Q9NTU7 201 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 ASIC5Q9NY37 505 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 SLC17A7Q9P2U7 560 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 MKLN1Q9UL63 735 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 SLC25A15Q9Y619 301 aa11.53□□□□□ -0.56
TPM1-220ENST00000559556 RNF103-CHMP3A0A140T963 221 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 H7C417 338 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 GPRIN2O60269 458 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 CYP7B1O75881 506 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 DHRS4L1P0CG22 281 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 FAM157CP0CG43 387 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 G6PDP11413 515 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 PTNP21246 168 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 CD40P25942 277 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 NTF4P34130 210 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 PGM1P36871 562 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 APOBEC1P41238 236 aaKnown RBP11.52□□□□□ -0.57
TPM1-220ENST00000559556 CLDN8P56748 225 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 DSCR9P59020 149 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 VLDLRP98155 873 aa11.52□□□□□ -0.57
TPM1-220ENST00000559556 LOXL1Q08397 574 aaPredicted RBP11.52□□□□□ -0.57
TPM1-220ENST00000559556 MAD2L1Q13257 205 aaPredicted RBP11.52□□□□□ -0.57
TPM1-220ENST00000559556 AP1ARQ63HQ0 302 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms