RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SH3GLB1Q9Y371 365 aa19.54■□□□□ 0.72
SNX1-206ENST00000559389 TRGV8A0A0C4DH27 118 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 H0Y3Z8 333 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 WDR1O75083 606 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 ATP6V1B2P21281 511 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 CASP6P55212 293 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 CTU2Q2VPK5 515 aaKnown RBP19.53■□□□□ 0.72
SNX1-206ENST00000559389 C1QL3Q5VWW1 255 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 POMZP3Q6PJE2 187 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 CCDC121Q6ZUS5 278 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 VTCN1Q7Z7D3 282 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 RBM45Q8IUH3 476 aaKnown RBP19.53■□□□□ 0.72
SNX1-206ENST00000559389 ULK2Q8IYT8 1036 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 UBQLNLQ8IYU4 475 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 MEIOBQ8N635 442 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 OR10Q1Q8NGQ4 319 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 PRR7Q8TB68 274 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 SLC25A43Q8WUT9 341 aaPredicted RBP19.53■□□□□ 0.72
SNX1-206ENST00000559389 CCDC124Q96CT7 223 aaKnown RBP19.53■□□□□ 0.72
SNX1-206ENST00000559389 ASB9Q96DX5 294 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 NSMCE2Q96MF7 247 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 MCHR1Q99705 422 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 TRIM2Q9C040 744 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 CHRNA9Q9UGM1 479 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 SH3BGRL2Q9UJC5 107 aa19.53■□□□□ 0.72
SNX1-206ENST00000559389 SAMD4AQ9UPU9 718 aaKnown RBP19.53■□□□□ 0.72
SNX1-206ENST00000559389 ZGRF1Q86YA3 2104 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 A0A1B0GWA3 101 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 SEC14L5O43304 696 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 GABRA1P14867 456 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 PTGER4P35408 488 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 SUCLG1P53597 346 aaKnown RBP19.52■□□□□ 0.72
SNX1-206ENST00000559389 CLDN15P56746 228 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 SRYQ05066 204 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 TRIM25Q14258 630 aaKnown RBP19.52■□□□□ 0.72
SNX1-206ENST00000559389 ACSF3Q4G176 576 aaPredicted RBP19.52■□□□□ 0.72
SNX1-206ENST00000559389 IFI44LQ53G44 452 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 ZNF585AQ6P3V2 769 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 PGM2L1Q6PCE3 622 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 LILRA2Q8N149 483 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 PHF10Q8WUB8 498 aaKnown RBP19.52■□□□□ 0.72
SNX1-206ENST00000559389 GEMIN6Q8WXD5 167 aaKnown RBP19.52■□□□□ 0.72
SNX1-206ENST00000559389 ADGRG7Q96K78 797 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 KLHL15Q96M94 604 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 PRR14Q9BWN1 585 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 CADM1Q9BY67 442 aaKnown RBP19.52■□□□□ 0.72
SNX1-206ENST00000559389 SERINC1Q9NRX5 453 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 STOML1Q9UBI4 398 aa19.52■□□□□ 0.72
SNX1-206ENST00000559389 SPIN1Q9Y657 262 aaPredicted RBP19.52■□□□□ 0.72
SNX1-206ENST00000559389 MED12Q93074 2177 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 TMED7-TICAM2A0A0A6YYA0 188 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 GJE1A6NN92 205 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 AHRRA9YTQ3 701 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 H0YC42 278 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 GSC2O15499 205 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 ACVR2AP27037 513 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 SFTPDP35247 375 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 OR1E2P47887 323 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 TPD52P55327 224 aaPredicted RBP19.51■□□□□ 0.71
SNX1-206ENST00000559389 OR1Q1Q15612 314 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 C1orf185Q5T7R7 199 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 LCN8Q6JVE9 175 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 ATG4DQ86TL0 474 aaPredicted RBP19.51■□□□□ 0.71
SNX1-206ENST00000559389 TSPYL5Q86VY4 417 aaPredicted RBP19.51■□□□□ 0.71
SNX1-206ENST00000559389 ADGRG3Q86Y34 549 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 FAM86B1Q8N7N1 296 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 RELTQ969Z4 430 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 TUBA1CQ9BQE3 449 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 C12orf10Q9HB07 376 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 RPS6KB2Q9UBS0 482 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 TMED7Q9Y3B3 224 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 FAM215AQ9Y5M1 114 aa19.51■□□□□ 0.71
SNX1-206ENST00000559389 A0A0B4J2E0 115 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 A0A1B0GX12 115 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 MS4A2Q01362 244 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 KCNC4Q03721 635 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 GABPB1Q06547 395 aaPredicted RBP19.5■□□□□ 0.71
SNX1-206ENST00000559389 C4orf17Q53FE4 359 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 SYT14P1Q58G82 188 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 ENTPD8Q5MY95 495 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 RTL6Q6ICC9 239 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 ZNF613Q6PF04 617 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 C3P1Q6ZMU1 363 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 ESPNLQ6ZVH7 1005 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 LSRQ86X29 649 aaPredicted RBP19.5■□□□□ 0.71
SNX1-206ENST00000559389 ATP6V1C2Q8NEY4 427 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 OR2V1Q8NHB1 315 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 ZPLD1Q8TCW7 415 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 DNAJA4Q8WW22 397 aaPredicted RBP19.5■□□□□ 0.71
SNX1-206ENST00000559389 COQ10BQ9H8M1 238 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 TMEM27Q9HBJ8 222 aa19.5■□□□□ 0.71
SNX1-206ENST00000559389 A0A0J9YW62 118 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 A0A1B0GUH1 482 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 TMEM72A0PK05 275 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 CPSF4LA6NMK7 179 aaKnown RBP19.49■□□□□ 0.71
SNX1-206ENST00000559389 E9PLN8 166 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 EIF1AYO14602 144 aaKnown RBP19.49■□□□□ 0.71
SNX1-206ENST00000559389 ADAMDEC1O15204 470 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 ZNF208O43345 1280 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 SEMA7AO75326 666 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms