RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CD300AQ9UGN4 299 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 OSGIN1Q9UJX0 560 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 RNF6Q9Y252 685 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 IFT52Q9Y366 437 aa10.27□□□□□ -0.77
SNX1-204ENST00000559061 USP9YO00507 2555 aaPredicted RBP10.26□□□□□ -0.77
SNX1-204ENST00000559061 PTPN13Q12923 2485 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 NBPF19A0A087WUL8 3843 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 A0A1W2PNR3 127 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 TMEM247A6NEH6 219 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 LINC01387J3KSC0 135 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 TNFSF11O14788 317 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 AQP8O94778 261 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 UBOX5O94941 541 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 LGI1O95970 557 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 GABRA1P14867 456 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 NCK1P16333 377 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 PGCP20142 388 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 TACR3P29371 465 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 SFTPDP35247 375 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 EIF1P41567 113 aaKnown RBP10.26□□□□□ -0.77
SNX1-204ENST00000559061 EEFSECP57772 596 aaKnown RBP10.26□□□□□ -0.77
SNX1-204ENST00000559061 MERTKQ12866 999 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 FOXF2Q12947 444 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 SELENBP1Q13228 472 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 ART3Q13508 389 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 CEACAM7Q14002 265 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 ENPP6Q6UWR7 440 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 GRINAQ7Z429 371 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 TSEN54Q7Z6J9 526 aaKnown RBP10.26□□□□□ -0.77
SNX1-204ENST00000559061 ATG4DQ86TL0 474 aaPredicted RBP10.26□□□□□ -0.77
SNX1-204ENST00000559061 ARMC8Q8IUR7 673 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 PM20D2Q8IYS1 436 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 PGAM4Q8N0Y7 254 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 LILRA2Q8N149 483 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 RNF148Q8N7C7 305 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 RELL2Q8NC24 303 aaPredicted RBP10.26□□□□□ -0.77
SNX1-204ENST00000559061 OR6T1Q8NGN1 323 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 OR10Q1Q8NGQ4 319 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 OR10D3Q8NH80 312 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 SLC35B4Q969S0 331 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 ARL5BQ96KC2 179 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 KLHL15Q96M94 604 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 TRIB1Q96RU8 372 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 OR11A1Q9GZK7 315 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 ALG2Q9H553 416 aa10.26□□□□□ -0.77
SNX1-204ENST00000559061 ING1Q9UK53 422 aaPredicted RBP10.26□□□□□ -0.77
SNX1-204ENST00000559061 ADGRG4Q8IZF6 3080 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 IGKV1D-42A0A075B6H8 117 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 TMED7-TICAM2A0A0A6YYA0 188 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 ELOVL7A1L3X0 281 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 ZNF814B7Z6K7 855 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 C19orf84I3L1E1 186 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 SYT5O00445 386 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 EIF1AYO14602 144 aaKnown RBP10.25□□□□□ -0.77
SNX1-204ENST00000559061 CXCL13O43927 109 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 NPIPB7O75200 414 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 FESP07332 822 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 GGT1P19440 569 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 GRNP28799 593 aaKnown RBP10.25□□□□□ -0.77
SNX1-204ENST00000559061 KDELR2P33947 212 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 PTGER4P35408 488 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 TIMP3P35625 211 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 SLC1A3P43003 542 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 CASP6P55212 293 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 EGR4Q05215 589 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 TFF3Q07654 80 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 BNIP2Q12982 314 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 TMEM176BQ3YBM2 270 aaPredicted RBP10.25□□□□□ -0.77
SNX1-204ENST00000559061 RIPPLY2Q5TAB7 128 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 ERICH5Q6P6B1 374 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 C6orf89Q6UWU4 347 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 WDR88Q6ZMY6 472 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 TRPM8Q7Z2W7 1104 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 PATL1Q86TB9 770 aaKnown RBP10.25□□□□□ -0.77
SNX1-204ENST00000559061 KRT73Q86Y46 540 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 SLC30A8Q8IWU4 369 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 ZNF440Q8IYI8 595 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 FAM86B1Q8N7N1 296 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 ATP6V1C2Q8NEY4 427 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 OR2V1Q8NHB1 315 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 FNDC9Q8TBE3 224 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 DNAJA3Q96EY1 480 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 NSL1Q96IY1 281 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 ZNF607Q96SK3 696 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 CALHM2Q9HA72 323 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 SPAG4Q9NPE6 437 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 TMED7Q9Y3B3 224 aa10.25□□□□□ -0.77
SNX1-204ENST00000559061 SPTAN1Q13813 2472 aaKnown RBP10.25□□□□□ -0.77
SNX1-204ENST00000559061 A0A0B4J2E0 115 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 A0A1B0GWA3 101 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 A0A1B0GX12 115 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 FAM47E-STBD1D6RA91 191 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 CXCR6O00574 342 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 RAMP1O60894 148 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 SERPINB7O75635 380 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 TNFSF13O75888 250 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 HOXD4P09016 255 aaPredicted RBP10.24□□□□□ -0.77
SNX1-204ENST00000559061 IMPDH2P12268 514 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 GP1BBP13224 206 aa10.24□□□□□ -0.77
SNX1-204ENST00000559061 HSD17B1P14061 328 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms