RNA–Protein interactions for RNA: ENST00000558518.5

LDLR-208, Transcript of low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDLR, Length 3,617 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-208ENST00000558518 MANSC4A6NHS7 340 aaPredicted RBP10.51□□□□□ -0.73
LDLR-208ENST00000558518 SEC14L5O43304 696 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 PTH2RP49190 550 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 CCR4P51679 360 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 PUS10Q3MIT2 529 aaKnown RBP10.51□□□□□ -0.73
LDLR-208ENST00000558518 DEFB134Q4QY38 66 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 NIPAL3Q6P499 406 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 CD200R1LQ6Q8B3 271 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 BTN2A1Q7KYR7 527 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 ADIPOR2Q86V24 386 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 DCUN1D3Q8IWE4 304 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 OR52N1Q8NH53 320 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 NKD1Q969G9 470 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 PINK1Q9BXM7 581 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 ZMAT3Q9HA38 289 aaKnown RBP10.51□□□□□ -0.73
LDLR-208ENST00000558518 HRASLSQ9HDD0 168 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 ASB6Q9NWX5 421 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 MRTO4Q9UKD2 239 aaKnown RBP10.51□□□□□ -0.73
LDLR-208ENST00000558518 ASB4Q9Y574 426 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 CREBL2O60519 120 aaPredicted RBP10.51□□□□□ -0.73
LDLR-208ENST00000558518 LDB3O75112 727 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 UBL3O95164 117 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 SOD2P04179 222 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 CTRB1P17538 263 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 ACHEP22303 614 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 TPMTP51580 245 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 PCBP4P57723 403 aaKnown RBP10.51□□□□□ -0.73
LDLR-208ENST00000558518 FOXK2Q01167 660 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 DUSP6Q16828 381 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 CTRB2Q6GPI1 263 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 LIN54Q6MZP7 749 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 FAM111BQ6SJ93 734 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 TMPRSS12Q86WS5 348 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 SYNPRQ8TBG9 265 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 KCNK15Q9H427 330 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 RETREG1Q9H6L5 497 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 POMT2Q9UKY4 750 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 ADAM18Q9Y3Q7 739 aa10.51□□□□□ -0.73
LDLR-208ENST00000558518 A0A1B0GTH9 108 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 SERTM1A2A2V5 107 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 ABLIM3O94929 683 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 PAK4O96013 591 aaPredicted RBP10.5□□□□□ -0.73
LDLR-208ENST00000558518 ASGR2P07307 311 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 GNA13Q14344 377 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 UBE3DQ7Z6J8 389 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 FCAMRQ8WWV6 532 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 DIO2Q92813 273 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 PTP4A1Q93096 173 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 SLC35A4Q96G79 324 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 ADAT1Q9BUB4 502 aaKnown RBP10.5□□□□□ -0.73
LDLR-208ENST00000558518 PDCD10Q9BUL8 212 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 ZNF768Q9H5H4 540 aaKnown RBP10.5□□□□□ -0.73
LDLR-208ENST00000558518 MRPS30Q9NP92 439 aaKnown RBP10.5□□□□□ -0.73
LDLR-208ENST00000558518 IFT46Q9NQC8 304 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 NDOR1Q9UHB4 597 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 LIPT1Q9Y234 373 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 A0A0G2JPF8 293 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 HNRNPCL3B7ZW38 293 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 HOXA2O43364 376 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 HNRNPCL4P0DMR1 293 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 TMIGD3P0DMS9 266 aaPredicted RBP10.5□□□□□ -0.73
LDLR-208ENST00000558518 DRD2P14416 443 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 NT5EP21589 574 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 CFL1P23528 166 aaKnown RBP10.5□□□□□ -0.73
LDLR-208ENST00000558518 AK4P27144 223 aaPredicted RBP10.5□□□□□ -0.73
LDLR-208ENST00000558518 BMP8BP34820 402 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 THBS2P35442 1172 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 STAT5AP42229 794 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 CCR9P51686 369 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 HTR3DQ70Z44 454 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 BMP8AQ7Z5Y6 402 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 GATSQ8NAP1 163 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 OR4E2Q8NGC2 313 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 OR10G6Q8NH81 332 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 CXorf40AQ8TE69 158 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 BPIFA2Q96DR5 249 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 SEC22AQ96IW7 307 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 HS6ST2Q96MM7 605 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 TMEM185BQ9H7F4 350 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 SPHK2Q9NRA0 654 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 KCMF1Q9P0J7 381 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 COPZ2Q9P299 210 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 MLXQ9UH92 298 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 GPR160Q9UJ42 338 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 C7orf66A4D0T2 115 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 KRT33AO76009 404 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 THY1P04216 161 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 ZGLP1P0C6A0 271 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 EPXP11678 715 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 EXOSC7Q15024 291 aaKnown RBP10.5□□□□□ -0.73
LDLR-208ENST00000558518 PCGF3Q3KNV8 242 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 LRFN4Q6PJG9 635 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 TMEM239Q8WW34 195 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 DTD2Q96FN9 168 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 HSPA12BQ96MM6 686 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 ULBP3Q9BZM4 244 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 LIN7BQ9HAP6 207 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 C12orf10Q9HB07 376 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 ICKQ9UPZ9 632 aa10.5□□□□□ -0.73
LDLR-208ENST00000558518 FARSAQ9Y285 508 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms