RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 TOMM34Q15785 309 aaPredicted RBP7.61□□□□□ -1.19
TPM1-213ENST00000558400 CTU2Q2VPK5 515 aaKnown RBP7.61□□□□□ -1.19
TPM1-213ENST00000558400 GTDC1Q4AE62 458 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 LIN52Q52LA3 116 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 RUNDC3AQ59EK9 446 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 COQ5Q5HYK3 327 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 GCNT6Q5T4J0 391 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 REEP3Q6NUK4 255 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 C3orf33Q6P1S2 294 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 DLEU7Q6UYE1 221 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 FAM214BQ7L5A3 538 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 RELL2Q8NC24 303 aaPredicted RBP7.61□□□□□ -1.19
TPM1-213ENST00000558400 BBS10Q8TAM1 723 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 FNDC9Q8TBE3 224 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 FIG4Q92562 907 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 TMEM19Q96HH6 336 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 GMPPAQ96IJ6 420 aaPredicted RBP7.61□□□□□ -1.19
TPM1-213ENST00000558400 ZNF607Q96SK3 696 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 CGREF1Q99674 301 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 TACO1Q9BSH4 297 aaKnown RBP7.61□□□□□ -1.19
TPM1-213ENST00000558400 SPATA9Q9BWV2 254 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 ZNF385DQ9H6B1 395 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 TMEM38AQ9H6F2 299 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 NPDC1Q9NQX5 325 aaPredicted RBP7.61□□□□□ -1.19
TPM1-213ENST00000558400 ELOVL5Q9NYP7 299 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 SLC25A37Q9NYZ2 338 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 VAPAQ9P0L0 249 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 SLAMF8Q9P0V8 285 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.61□□□□□ -1.19
TPM1-213ENST00000558400 NDRG3Q9UGV2 375 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 EMC9Q9Y3B6 208 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 PCNX3Q9H6A9 2034 aa7.61□□□□□ -1.19
TPM1-213ENST00000558400 CCDC168Q8NDH2 2452 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 DSPPQ9NZW4 1301 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 TRBV5-3A0A0A0MS03 114 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 CENPVL1A0A0U1RR11 272 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 CDHR4A6H8M9 788 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 PRORSD1PA6NEY8 169 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 TUBAL3A6NHL2 446 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 BBIP1A8MTZ0 92 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 EEF1E1-BLOC1S5C9J1V9 151 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 TNFSF11O14788 317 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 EEF1E1O43324 174 aaKnown RBP7.6□□□□□ -1.19
TPM1-213ENST00000558400 ZNF208O43345 1280 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 CCDC22O60826 627 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 TNFSF13O75888 250 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 PRKD3O94806 890 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 GOSR1O95249 250 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 C1QCP02747 245 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 OPN1LWP04000 364 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 ARAFP10398 606 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 SLC1A3P43003 542 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 KIR2DL2P43627 348 aaPredicted RBP7.6□□□□□ -1.19
TPM1-213ENST00000558400 CPA2P48052 419 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 POLR2HP52434 150 aaKnown RBP7.6□□□□□ -1.19
TPM1-213ENST00000558400 AGFG1P52594 562 aaKnown RBP7.6□□□□□ -1.19
TPM1-213ENST00000558400 CDK6Q00534 326 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 FOXF2Q12947 444 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 NFYCQ13952 458 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 MAPK11Q15759 364 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 NDUFAF6Q330K2 333 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 MMEL1Q495T6 779 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 ZNF311Q5JNZ3 666 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 MRPL2Q5T653 305 aaKnown RBP7.6□□□□□ -1.19
TPM1-213ENST00000558400 RNF220Q5VTB9 566 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 TMPPEQ6ZT21 453 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 PLEKHM3Q6ZWE6 761 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 OLIG3Q7RTU3 272 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 STK32CQ86UX6 486 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 ADGRG3Q86Y34 549 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 SLC30A8Q8IWU4 369 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 GCNT2Q8N0V5 402 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 CNEP1R1Q8N9A8 125 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 PCYOX1LQ8NBM8 494 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 ATP6V1C2Q8NEY4 427 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 FAM222BQ8WU58 562 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 CNOT9Q92600 299 aaKnown RBP7.6□□□□□ -1.19
TPM1-213ENST00000558400 STARD4Q96DR4 205 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 ZHX1-C8orf76Q96EF9 292 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 ZNF845Q96IR2 970 aaPredicted RBP7.6□□□□□ -1.19
TPM1-213ENST00000558400 ANKRD27Q96NW4 1050 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 ZNF317Q96PQ6 595 aaPredicted RBP7.6□□□□□ -1.19
TPM1-213ENST00000558400 ZNF559Q9BR84 538 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 CCDC106Q9BWC9 280 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 RBM24Q9BX46 236 aaKnown RBP7.6□□□□□ -1.19
TPM1-213ENST00000558400 ADAM19Q9H013 955 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 QRSL1Q9H0R6 528 aaKnown RBP7.6□□□□□ -1.19
TPM1-213ENST00000558400 TMEM185BQ9H7F4 350 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 MCCC2Q9HCC0 563 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 SAR1AQ9NR31 198 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 PLSCR4Q9NRQ2 329 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 GID8Q9NWU2 228 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 DNAJB12Q9NXW2 375 aaKnown RBP7.6□□□□□ -1.19
TPM1-213ENST00000558400 CHRNA9Q9UGM1 479 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 TRAPPC4Q9Y296 219 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 HDGFL3Q9Y3E1 203 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 PKDREJQ9NTG1 2253 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 PDZD2O15018 2839 aa7.6□□□□□ -1.19
TPM1-213ENST00000558400 CLDN24A6NM45 220 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 SULT2B1O00204 365 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms