RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PLCXD3Q63HM9 321 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 OR4F15Q8NGB8 312 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 OR5M1Q8NGP8 315 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 CHTF18Q8WVB6 975 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 PIGCQ92535 297 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 HAPLN2Q9GZV7 340 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 V9GY05 133 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 AQP9O43315 295 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 CYTIPO60759 359 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 MYOGP15173 224 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 GCH1P30793 250 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 AHRP35869 848 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 METAP1DQ6UB28 335 aaPredicted RBP13.09□□□□□ -0.31
SPG11-210ENST00000558319 DNAJC22Q8N4W6 341 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 TRMT2BQ96GJ1 504 aaKnown RBP13.09□□□□□ -0.31
SPG11-210ENST00000558319 FN3KRPQ9HA64 309 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 RIMS3Q9UJD0 308 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 EIF2DP41214 584 aaKnown RBP13.09□□□□□ -0.31
SPG11-210ENST00000558319 WNT7BP56706 349 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 LTBQ06643 244 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 PXT1Q8NFP0 134 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 TXN2Q99757 166 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 RTP3Q9BQQ7 232 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 EHFQ9NZC4 300 aa13.09□□□□□ -0.31
SPG11-210ENST00000558319 NPIPB15A6NHN6 443 aaPredicted RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 G3V2L1 256 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 KHDC1LQ5JSQ8 128 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 OR10K2Q6IF99 312 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 FCRLAQ7L513 359 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 CLEC1AQ8NC01 280 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 RNF128Q8TEB7 428 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 RBPMSQ93062 196 aaKnown RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 PRRT1Q99946 306 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 DCCP43146 1447 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 MYH7BA7E2Y1 1941 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 FZD7O75084 574 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 SCGB2A1O75556 95 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 ZNF865P0CJ78 1059 aaPredicted RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 POU3F2P20265 443 aaPredicted RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 NPBWR1P48145 328 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 DLX5P56178 289 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 SIRPAP78324 504 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 NR0B2Q15466 257 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 Q6ZPB1 254 aaPredicted RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 OR52R1Q8NGF1 315 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 OR4K15Q8NH41 348 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 FOXJ1Q92949 421 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 TEX51A0A1B0GUA7 166 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 H7C1C5 153 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 VEGFDO43915 354 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 ZNF780AO75290 641 aaPredicted RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 CLDN12P56749 244 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 LCN6P62502 163 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 RACK1P63244 317 aaKnown RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 PLA2G7Q13093 441 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 ARHGAP19Q14CB8 494 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 CLLU1OSQ5K130 101 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 OR2G6Q5TZ20 316 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 LINC00696Q6ZRV3 163 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 BPIFB2Q8N4F0 458 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 SLC30A7Q8NEW0 376 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 OR4M1Q8NGD0 313 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 GPR148Q8TDV2 347 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 CENPOQ9BU64 300 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 TPPP3Q9BW30 176 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 PARP12Q9H0J9 701 aaKnown RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 MYH2Q9UKX2 1941 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 C17orf113A0A1B0GUU1 675 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 IGFBP1P08833 259 aaPredicted RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 MLF1P58340 268 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 TESK1Q15569 626 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 UBE2NLQ5JXB2 153 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 EXOSC6Q5RKV6 272 aaKnown RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 COX15Q7KZN9 410 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 FAM160A2Q8N612 972 aaPredicted RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 IMP4Q96G21 291 aaKnown RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 SAP130Q9H0E3 1048 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 IGSF5Q9NSI5 407 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 KLHL13Q9P2N7 655 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 FDXRP22570 491 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 TAGLN2P37802 199 aaKnown RBP13.08□□□□□ -0.32
SPG11-210ENST00000558319 SPINT3P49223 89 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 KIAA0319Q5VV43 1072 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 MOB3CQ70IA8 216 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 GGHQ92820 318 aa13.08□□□□□ -0.32
SPG11-210ENST00000558319 SEC14L2O76054 403 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 OR13C7P0DN81 318 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 SLC5A2P31639 672 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 ETV1P50549 477 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 TPMTP51580 245 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 MAMDC2Q7Z304 686 aaPredicted RBP13.07□□□□□ -0.32
SPG11-210ENST00000558319 SLC7A13Q8TCU3 470 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 C14orf79Q96F83 325 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 FCRL1Q96LA6 429 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 OR2M2Q96R28 347 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 SPO11Q9Y5K1 396 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 SNED1Q8TER0 1413 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 PHLPP1O60346 1717 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 BCL9LQ86UU0 1499 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 GABRPO00591 440 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms