RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 EEF1E1O43324 174 aaKnown RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 ZIC3O60481 467 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 NME6O75414 186 aaPredicted RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 WISP2O76076 250 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 BAG2O95816 211 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 SLC7A1P30825 629 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 TTKP33981 857 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 ADH7P40394 386 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 MRPL19P49406 292 aaKnown RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 LHX2P50458 406 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 ATP4BP51164 291 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 MAP2K6P52564 334 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 CRISP3P54108 245 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 AQP5P55064 265 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 CTBP2P56545 445 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 NME5P56597 212 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 UFM1P61960 85 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 SORDQ00796 357 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 FADDQ13158 208 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 SELENBP1Q13228 472 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 SQLEQ14534 574 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 LARS2Q15031 903 aaKnown RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 ZNF141Q15928 474 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 FBXL19-AS1Q494R0 122 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 KLHL26Q53HC5 615 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 EXOSC6Q5RKV6 272 aaKnown RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 CCNJQ5T5M9 372 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 OGFRL1Q5TC84 451 aaPredicted RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 RTL6Q6ICC9 239 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 PPP4R4Q6NUP7 873 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 METTL25Q8N6Q8 603 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 ANKK1Q8NFD2 765 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 OR5W2Q8NH69 310 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 ST8SIA1Q92185 356 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 SMPDL3BQ92485 455 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 CPNE4Q96A23 557 aaPredicted RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 ROPN1LQ96C74 230 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 SH3YL1Q96HL8 342 aaPredicted RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 SDF2Q99470 211 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 TUBA1CQ9BQE3 449 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 OSBPL10Q9BXB5 764 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 ENKD1Q9H0I2 346 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 MTHFD2LQ9H903 347 aaPredicted RBP7.83□□□□□ -1.16
USP3-208ENST00000558285 NPHS2Q9NP85 383 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 MED17Q9NVC6 651 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 NDRG3Q9UGV2 375 aa7.83□□□□□ -1.16
USP3-208ENST00000558285 ICE1Q9Y2F5 2266 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 B2RBV5 119 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 EIF1AYO14602 144 aaKnown RBP7.82□□□□□ -1.16
USP3-208ENST00000558285 MAGEB3O15480 346 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 IDH3BO43837 385 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 CYP7B1O75881 506 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 TOXO94900 526 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 DBIP07108 87 aaKnown RBP7.82□□□□□ -1.16
USP3-208ENST00000558285 OR12D1P0DN82 309 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 IL7RP16871 459 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 TCEA1P23193 301 aaKnown RBP7.82□□□□□ -1.16
USP3-208ENST00000558285 CRATP43155 626 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 KIR2DL3P43628 341 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 EIF1AXP47813 144 aaKnown RBP7.82□□□□□ -1.16
USP3-208ENST00000558285 ALDH3B2P48448 385 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 PCYT1AP49585 367 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 CLDN18P56856 261 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 COPZ1P61923 177 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 RNPS1Q15287 305 aaKnown RBP7.82□□□□□ -1.16
USP3-208ENST00000558285 ZNF362Q5T0B9 420 aaPredicted RBP7.82□□□□□ -1.16
USP3-208ENST00000558285 METTL21CQ5VZV1 264 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 TNFAIP8L2Q6P589 184 aaPredicted RBP7.82□□□□□ -1.16
USP3-208ENST00000558285 ARSKQ6UWY0 536 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 TREML4Q6UXN2 200 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 DCDC5Q6ZRR9 648 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 KRT73Q86Y46 540 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 GATSQ8NAP1 163 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 OR5D16Q8NGK9 328 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 ZNF563Q8TA94 476 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 FAM222BQ8WU58 562 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 ARSGQ96EG1 525 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 NEURL2Q9BR09 285 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 SPATA5L1Q9BVQ7 753 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 PINK1Q9BXM7 581 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 ZNF350Q9GZX5 532 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 LAT2Q9GZY6 243 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 GP6Q9HCN6 339 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 SLCO1B3Q9NPD5 702 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 ELOVL5Q9NYP7 299 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 SELENONQ9NZV5 590 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 SLC7A8Q9UHI5 535 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 SLC13A4Q9UKG4 626 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 GTF3C1Q12789 2109 aa7.82□□□□□ -1.16
USP3-208ENST00000558285 PRRC2CQ9Y520 2896 aaKnown RBP7.81□□□□□ -1.16
USP3-208ENST00000558285 NKX2-6A6NCS4 301 aa7.81□□□□□ -1.16
USP3-208ENST00000558285 TUBAL3A6NHL2 446 aa7.81□□□□□ -1.16
USP3-208ENST00000558285 MSTNO14793 375 aa7.81□□□□□ -1.16
USP3-208ENST00000558285 ANGPT2O15123 496 aa7.81□□□□□ -1.16
USP3-208ENST00000558285 ZNHIT1O43257 154 aa7.81□□□□□ -1.16
USP3-208ENST00000558285 GMFGO60234 142 aa7.81□□□□□ -1.16
USP3-208ENST00000558285 KIAA0513O60268 411 aa7.81□□□□□ -1.16
USP3-208ENST00000558285 PGM3O95394 542 aa7.81□□□□□ -1.16
USP3-208ENST00000558285 IGKV1D-16P01601 117 aa7.81□□□□□ -1.16
USP3-208ENST00000558285 SNRPB2P08579 225 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms