RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ANKFN1Q8N957 763 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 DNAAF3Q8N9W5 541 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 OR2T3Q8NH03 318 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 EXOC6Q8TAG9 804 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 CCDC12Q8WUD4 166 aaPredicted RBP2.27□□□□□ -2.05
SPG11-206ENST00000558093 MAIP1Q8WWC4 291 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 ASZ1Q8WWH4 475 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 P3H4Q92791 437 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 KIFAP3Q92845 792 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 DLX4Q92988 240 aaPredicted RBP2.27□□□□□ -2.05
SPG11-206ENST00000558093 TADA1Q96BN2 335 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 PPP1R14BQ96C90 147 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 DTD2Q96FN9 168 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 NSMCE2Q96MF7 247 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 TSG101Q99816 390 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 CNPY3Q9BT09 278 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 ZNF416Q9BWM5 594 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 TM2D1Q9BX74 207 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 SPZ1Q9BXG8 430 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 DDX47Q9H0S4 455 aaKnown RBP2.27□□□□□ -2.05
SPG11-206ENST00000558093 FAM124BQ9H5Z6 455 aaPredicted RBP2.27□□□□□ -2.05
SPG11-206ENST00000558093 EXO5Q9H790 373 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 PTGES2Q9H7Z7 377 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 ECT2Q9H8V3 914 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 LZTFL1Q9NQ48 299 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 PRMT8Q9NR22 394 aaPredicted RBP2.27□□□□□ -2.05
SPG11-206ENST00000558093 NRBP2Q9NSY0 501 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 DCAF13Q9NV06 445 aaKnown RBP2.27□□□□□ -2.05
SPG11-206ENST00000558093 ETNK2Q9NVF9 386 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 HYPKQ9NX55 129 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 STX18Q9P2W9 335 aaKnown RBP2.27□□□□□ -2.05
SPG11-206ENST00000558093 CD300AQ9UGN4 299 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 HMGXB4Q9UGU5 601 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 TRMT6Q9UJA5 497 aaKnown RBP2.27□□□□□ -2.05
SPG11-206ENST00000558093 KLHDC2Q9Y2U9 406 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 U3KQV3 271 aa2.27□□□□□ -2.05
SPG11-206ENST00000558093 PARD3Q8TEW0 1356 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 MACROD2A1Z1Q3 448 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ARHGAP42A6NI28 874 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 SPECC1L-ADORA2AF8WAN1 911 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 H3BMH7 237 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 K7EQM0 130 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 TLR4O00206 839 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 XPO1O14980 1071 aaKnown RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 CLDN3O15551 220 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 B4GALT2O60909 372 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 LRP3O75074 770 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ECI2O75521 394 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 CRTAPO75718 401 aaPredicted RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 ZNF189O75820 626 aaPredicted RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 CBR3O75828 277 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ERLIN2O94905 339 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 LGI1O95970 557 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 PRB2P02812 416 aaPredicted RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 OPN1LWP04000 364 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 IGKV3-11P04433 115 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 KRT8P05787 483 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 PROS1P07225 676 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ASNSP08243 561 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 IGFBP1P08833 259 aaPredicted RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 OR8G3PP0DMU2 310 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 PRPS2P11908 318 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ATP6V1C1P21283 382 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 TUBG1P23258 451 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 CDKN1BP46527 198 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 STK19P49842 368 aaPredicted RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 CNN1P51911 297 aaKnown RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 AIF1P55008 147 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 UBE2IP63279 158 aaKnown RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 TGM3Q08188 693 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 PSG7Q13046 419 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ITGB3BPQ13352 177 aaPredicted RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 ORC2Q13416 577 aaPredicted RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 SNCBQ16143 134 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 CCDC14Q49A88 953 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 SBK1Q52WX2 424 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 BEND6Q5SZJ8 279 aaPredicted RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 PIP5KL1Q5T9C9 394 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ARMC12Q5T9G4 340 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 SASS6Q6UVJ0 657 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 NCCRP1Q6ZVX7 275 aaPredicted RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 LRRC70Q7Z2Q7 622 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 P4HA3Q7Z4N8 544 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 KIAA1328Q86T90 577 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ADAMTSL2Q86TH1 951 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 FAM228AQ86W67 206 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ERI1Q8IV48 349 aaKnown RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 C9orf40Q8IXQ3 194 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 LRRC34Q8IZ02 419 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 BPIFCQ8NFQ6 507 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 STEAP2Q8NFT2 490 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 PDCD6IPQ8WUM4 868 aaKnown RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 RLN3Q8WXF3 142 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 PIBF1Q8WXW3 757 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 PHYHIPQ92561 330 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ISG20Q96AZ6 181 aaKnown RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 ZNF707Q96C28 371 aaPredicted RBP2.26□□□□□ -2.05
SPG11-206ENST00000558093 C14orf79Q96F83 325 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 EEF2KMTQ96G04 330 aa2.26□□□□□ -2.05
SPG11-206ENST00000558093 ZNF607Q96SK3 696 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms