RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 SNED1Q8TER0 1413 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 CNTNAP2Q9UHC6 1331 aa3.19□□□□□ -1.9
TDP1-217ENST00000557782 METP08581 1390 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 USP47Q96K76 1375 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 A0A087WW49 117 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 IGHV3-20A0A0C4DH32 117 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 WDR91A4D1P6 747 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 CCT8L1PA6NM43 557 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 LRRIQ3A6PVS8 624 aaPredicted RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 E7ESA3 106 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 FCN1O00602 326 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 TRAFD1O14545 582 aaPredicted RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 EIF3HO15372 352 aaKnown RBP eCLIP3.18□□□□□ -1.9
TDP1-217ENST00000557782 RRP8O43159 456 aaKnown RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 FGF17O60258 216 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 OR10H3O60404 316 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 HPP00738 406 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 CRYAAP02489 173 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 SNRPCP09234 159 aaKnown RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 CLTAP09496 248 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 UBCP0CG48 685 aaKnown RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 ZNF43P17038 809 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 POLR2EP19388 210 aaKnown RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 COX5AP20674 150 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 CCNOP22674 350 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 SPAM1P38567 509 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 ETV5P41161 510 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 MRPL19P49406 292 aaKnown RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 ARRB1P49407 418 aaPredicted RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 DAP3P51398 398 aaKnown RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 MFAP2P55001 183 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 RAD51Q06609 339 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 ZNF33BQ06732 778 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 ZFP36L1Q07352 338 aaKnown RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 SCRN3Q0VDG4 424 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 SLAQ13239 276 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 ZNF177Q13360 481 aaPredicted RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 MTF1Q14872 753 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 ANGPT1Q15389 498 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 USF2Q15853 346 aaPredicted RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 CYP51A1Q16850 503 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 TIGITQ495A1 244 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 TMEM52BQ4KMG9 183 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 EIPR1Q53HC9 387 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 LGSNQ5TDP6 509 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 SEL1L2Q5TEA6 688 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 REP15Q6BDI9 236 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 PVRIGQ6DKI7 326 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 C22orf42Q6IC83 251 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 SLC35E4Q6ICL7 350 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 H3F3CQ6NXT2 135 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 DEGS2Q6QHC5 323 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 GDPD4Q6W3E5 623 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 C3P1Q6ZMU1 363 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 NIPA1Q7RTP0 329 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 PRSS48Q7RTY5 328 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 CATSPERDQ86XM0 798 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 NUDCD3Q8IVD9 361 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 ST13P4Q8IZP2 240 aaPredicted RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 BEST4Q8NFU0 473 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 OR2T33Q8NG76 320 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 RFESDQ8TAC1 157 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 FAM110BQ8TC76 370 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 CD300LFQ8TDQ1 290 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 TCTEX1D2Q8WW35 142 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 HTR3CQ8WXA8 447 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 FAF2Q96CS3 445 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 ASB9Q96DX5 294 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 MED30Q96HR3 178 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 JSRP1Q96MG2 331 aaPredicted RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 RNF2Q99496 336 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 PAIP2Q9BPZ3 127 aaKnown RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 TMEM175Q9BSA9 504 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 DGCR6LQ9BY27 220 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 NAT10Q9H0A0 1025 aaKnown RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 PPDPFQ9H3Y8 114 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 LIME1Q9H400 295 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 C6orf106Q9H6K1 298 aaPredicted RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 RANBP3Q9H6Z4 567 aaPredicted RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 ADAP2Q9NPF8 381 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 IL1RAPQ9NPH3 570 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 IFNKQ9P0W0 207 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 WRAP73Q9P2S5 460 aaPredicted RBP3.18□□□□□ -1.9
TDP1-217ENST00000557782 PHF11Q9UIL8 331 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 MGAT4AQ9UM21 535 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 NTNG1Q9Y2I2 539 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 MROH7-TTC4A0A0A0MT08 1334 aa3.18□□□□□ -1.9
TDP1-217ENST00000557782 DOCK7Q96N67 2140 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 KCNE1BA0A087WTH5 132 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 TRBV5-4A0A0C4DH59 114 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.17□□□□□ -1.9
TDP1-217ENST00000557782 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.17□□□□□ -1.9
TDP1-217ENST00000557782 TCRBV9S1A1TA0A576 114 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 MYMKA6NI61 221 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 SAGE2PA6NJ88 616 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 IDSB3KWA1 339 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 SIRPB1O00241 398 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 ZNF749O43361 778 aa3.17□□□□□ -1.9
TDP1-217ENST00000557782 KDELR3O43731 214 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms