RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 GATBO75879 557 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 ADH1CP00326 375 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 DBIP07108 87 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 GKN3PP0CG01 181 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 LAMP2P13473 410 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 TYRP1P17643 537 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 PSMB1P20618 241 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 NDUFS1P28331 727 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 GDI2P50395 445 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 GBX2P52951 348 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 NTHL1P78549 312 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 MESP2Q0VG99 397 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 OPCMLQ14982 345 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 DUSP5Q16690 384 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 TP53I3Q53FA7 332 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 LINGO2Q7L985 606 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 CHMP1BQ7LBR1 199 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 IZUMO1Q8IYV9 350 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 CYB561A3Q8NBI2 242 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 MFSD9Q8NBP5 474 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 FAM71CQ8NEG0 241 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 OR11G2Q8NGC1 345 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 LGALS14Q8TCE9 139 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 RAB7BQ96AH8 199 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 VWCEQ96DN2 955 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 SMIM19Q96E16 107 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 PEX11GQ96HA9 241 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 PPA2Q9H2U2 334 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 PLEKHA1Q9HB21 404 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 HCN3Q9P1Z3 774 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 RCE1Q9Y256 329 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 MED31Q9Y3C7 131 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 AK6Q9Y3D8 172 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 PCDHGA9Q9Y5G4 932 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 SCN3AQ9NY46 2000 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 A0A1B0GUH1 482 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 C1QTNF3-AMACRE9PGA6 284 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 ZNF749O43361 778 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 LYPD3O95274 346 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 TFP02787 698 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 UCHL1P09936 223 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 AP3S2P59780 193 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 CDK5R1Q15078 307 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 AMZ1Q400G9 498 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 TCTE1Q5JU00 501 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 SEZ6L2Q6UXD5 910 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 SSX6Q7RTT6 188 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 LSRQ86X29 649 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 GRAMD2AQ8IUY3 354 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 ZNF619Q8N2I2 560 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 C7orf57Q8NEG2 295 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 OR2L3Q8NG85 312 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 DDOQ99489 341 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 ORAI3Q9BRQ5 295 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 SARGQ9BW04 601 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 HRASLSQ9HDD0 168 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 NANSQ9NR45 359 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 MRPL15Q9P015 296 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 FLVCR2Q9UPI3 526 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 NOTCH4Q99466 2003 aa10.93□□□□□ -0.66
VIPAS39-211ENST00000557658 TRAV27A0A087WT01 109 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 hCG_1807616A0A1W2PRN6 198 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 ANKRD61A6NGH8 418 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 IGLON5A6NGN9 336 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 GMDSO60547 372 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 RNGTTO60942 597 aaKnown RBP10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 SNAPC5O75971 98 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 PPP1R3DO95685 299 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 IFNGP01579 166 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 ATP1B1P05026 303 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 VEGFCP49767 419 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 ACTA2P62736 377 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 ACTG2P63267 376 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 ELFN2Q5R3F8 820 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 MRPL2Q5T653 305 aaKnown RBP10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 Q6ZTK2 550 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 ANKRD33Q7Z3H0 272 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 UBE2Q1Q7Z7E8 422 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 SAMD14Q8IZD0 417 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 CMTM4Q8IZR5 234 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 OR2L13Q8N349 312 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 OR52E1Q8NGJ3 308 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 OR51A7Q8NH64 312 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 LCORQ96JN0 433 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 C10orf90Q96M02 699 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 ARPC5LQ9BPX5 153 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 HDAC8Q9BY41 377 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 CHIAQ9BZP6 476 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 OR10A4Q9H209 315 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 NRIP3Q9NQ35 241 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 KCMF1Q9P0J7 381 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 FBXL4Q9UKA2 621 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 GPR89AB7ZAQ6 455 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 PRICKLE3O43900 615 aaPredicted RBP10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 FMO6PO60774 539 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 HRGP04196 525 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 GYPBP06028 91 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 GPR89BP0CG08 455 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 CMPK1P30085 196 aa10.92□□□□□ -0.66
VIPAS39-211ENST00000557658 MAT2AP31153 395 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms