RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 MCHR1Q99705 422 aa12.75□□□□□ -0.37
SUPT16H-208ENST00000557652 TIMP4Q99727 224 aa12.75□□□□□ -0.37
SUPT16H-208ENST00000557652 TSPAN10Q9H1Z9 355 aaPredicted RBP12.75□□□□□ -0.37
SUPT16H-208ENST00000557652 TP63Q9H3D4 680 aaPredicted RBP12.75□□□□□ -0.37
SUPT16H-208ENST00000557652 CHRNA9Q9UGM1 479 aa12.75□□□□□ -0.37
SUPT16H-208ENST00000557652 ACAD8Q9UKU7 415 aa12.75□□□□□ -0.37
SUPT16H-208ENST00000557652 SH3GLB1Q9Y371 365 aa12.75□□□□□ -0.37
SUPT16H-208ENST00000557652 LIPGQ9Y5X9 500 aa12.75□□□□□ -0.37
SUPT16H-208ENST00000557652 A0A0B4J2E0 115 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 A0A1B0GX12 115 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 TRAPPC13A5PLN9 417 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 TMEM229AB2RXF0 380 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 ACOT8O14734 319 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 SLC19A2O60779 497 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 ADAM11O75078 769 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 OR5F1O95221 314 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 STSP08842 583 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 NCK1P16333 377 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 CXCR1P25024 350 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 LHX2P50458 406 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 FLOT2Q14254 428 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 TOMM34Q15785 309 aaPredicted RBP12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 MTFR2Q6P444 385 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 CYP4Z1Q86W10 505 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 CHERPQ8IWX8 916 aaKnown RBP12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 C10orf67Q8IYJ2 551 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 POC1BQ8TC44 478 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 STK35Q8TDR2 534 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 PHF10Q8WUB8 498 aaKnown RBP12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 SLC38A4Q969I6 547 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 C3orf49Q96BT1 292 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 DDIT4LQ96D03 193 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 UCN2Q96RP3 112 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 RSPO3Q9BXY4 272 aaPredicted RBP12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 ANKRD19PQ9H560 264 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 TIGARQ9NQ88 270 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 GMPR2Q9P2T1 348 aaKnown RBP12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 SPRR3Q9UBC9 169 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 OSGIN1Q9UJX0 560 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 RPH3AQ9Y2J0 694 aaPredicted RBP12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 SLC6A5Q9Y345 797 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 HDGFL3Q9Y3E1 203 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 ZNF337Q9Y3M9 751 aa12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 INTS1Q8N201 2190 aaKnown RBP12.74□□□□□ -0.37
SUPT16H-208ENST00000557652 MYO18BQ8IUG5 2567 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 A0A1B0GUH1 482 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 ADAMDEC1O15204 470 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 CHP2O43745 196 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 CIB2O75838 187 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 PDE5AO76074 875 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 PRG2P13727 222 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 TACR3P29371 465 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 RNF144AP50876 292 aaPredicted RBP12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 CLDN18P56856 261 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 GK3PQ14409 553 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 OR1Q1Q15612 314 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 ALG10BQ5I7T1 473 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 COLEC12Q5KU26 742 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 CHMP1BQ7LBR1 199 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 PIWIL3Q7Z3Z3 882 aaKnown RBP12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 ATG4DQ86TL0 474 aaPredicted RBP12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 COMTD1Q86VU5 262 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 CADM2Q8N3J6 435 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 ADAMTS16Q8TE57 1224 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 CCDC124Q96CT7 223 aaKnown RBP12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 WDYHV1Q96HA8 205 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 PRRC1Q96M27 445 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 KLHL15Q96M94 604 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 RAB3IPQ96QF0 476 aaPredicted RBP12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 POTEKPQ9BYX7 375 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 SLC19A3Q9BZV2 496 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 SLC7A8Q9UHI5 535 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 PACSIN3Q9UKS6 424 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 POMPQ9Y244 141 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 TRAPPC4Q9Y296 219 aa12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 FAM32AQ9Y421 112 aaKnown RBP12.73□□□□□ -0.37
SUPT16H-208ENST00000557652 A0A087WUJ7 227 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 TMED7-TICAM2A0A0A6YYA0 188 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 A0A1B0GWA3 101 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 ELOA3DA6NLF2 546 aaPredicted RBP12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 A8MVM7 634 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 NPIPA2E9PIF3 369 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 NPIPA3F8WFD2 350 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 M0R3H8 397 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 FRS3O43559 492 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 GMFGO60234 142 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 PRKD3O94806 890 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 IGF2P01344 180 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 GPIP06744 558 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 RHCEP18577 417 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 HTR2AP28223 471 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 RBM34P42696 430 aaKnown RBP12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 CA7P43166 264 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 SMIM11AP58511 58 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 CSNK2A1P68400 391 aaPredicted RBP12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 MS4A2Q01362 244 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 ST3GAL3Q11203 375 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 MFSD13AQ14CX5 517 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 ZSCAN26Q16670 478 aa12.72□□□□□ -0.37
SUPT16H-208ENST00000557652 EIF2S3LQ2VIR3 472 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms