RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 BOLA3Q53S33 107 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 ODF2Q5BJF6 829 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 TFDP3Q5H9I0 405 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 GLRA4Q5JXX5 417 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 SEL1L2Q5TEA6 688 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 TAF3Q5VWG9 929 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 CAPN13Q6MZZ7 669 aaPredicted RBP2.68□□□□□ -1.98
VRK1-207ENST00000557352 PMF1Q6P1K2 205 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 DNAJC24Q6P3W2 148 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 SCARA5Q6ZMJ2 495 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 PAQR9Q6ZVX9 377 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 STRADAQ7RTN6 431 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 SIAH3Q8IW03 269 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 CNPY4Q8N129 248 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 THEM5Q8N1Q8 247 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 GVQW1Q8N7I0 195 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 SPATA4Q8NEY3 305 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 GANCQ8TET4 914 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 TOP1MTQ969P6 601 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 NTAN1Q96AB6 310 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 SMARCD1Q96GM5 515 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 C16orf58Q96GQ5 468 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 CASD1Q96PB1 797 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 RAB40CQ96S21 281 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 CPXM1Q96SM3 734 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 EBF4Q9BQW3 602 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 MRPL45Q9BRJ2 306 aaKnown RBP2.68□□□□□ -1.98
VRK1-207ENST00000557352 C11orf70Q9BRQ4 267 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 CARD6Q9BX69 1037 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 CXCL16Q9H2A7 254 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 MMADHCQ9H3L0 296 aaPredicted RBP2.68□□□□□ -1.98
VRK1-207ENST00000557352 C11orf49Q9H6J7 331 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 LRRC19Q9H756 370 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 ACP6Q9NPH0 428 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 MRPL17Q9NRX2 175 aaKnown RBP2.68□□□□□ -1.98
VRK1-207ENST00000557352 IMPAD1Q9NX62 359 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 SPG21Q9NZD8 308 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 IL37Q9NZH6 218 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 HMGXB4Q9UGU5 601 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 CYTH4Q9UIA0 394 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 ADAM28Q9UKQ2 775 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 TFR2Q9UP52 801 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 MTF2Q9Y483 593 aaPredicted RBP2.68□□□□□ -1.98
VRK1-207ENST00000557352 PLXNB3Q9ULL4 1909 aa2.68□□□□□ -1.98
VRK1-207ENST00000557352 F5P12259 2224 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 IGHV3OR16-12A0A075B7B8 117 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 MAGEB16A2A368 324 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 A4D1N5 150 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 SPOPO43791 374 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 GLCEO94923 617 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 SLC16A8O95907 504 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 IGLV3-25P01717 112 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 SLC35E2P0CK97 266 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 MDKP21741 143 aaPredicted RBP2.67□□□□□ -1.98
VRK1-207ENST00000557352 GLRA1P23415 457 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 HCAR3P49019 387 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 DAOAP59103 153 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 ZNF33AQ06730 810 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 MFGE8Q08431 387 aaPredicted RBP2.67□□□□□ -1.98
VRK1-207ENST00000557352 CUL1Q13616 776 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 RCN2Q14257 317 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 MESDQ14696 234 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 PDK2Q15119 407 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 DPYSL2Q16555 572 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 HADHQ16836 314 aaKnown RBP2.67□□□□□ -1.98
VRK1-207ENST00000557352 GOLGA7BQ2TAP0 167 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 SMU1Q2TAY7 513 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 SLC25A52Q3SY17 297 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 PAN3Q58A45 887 aaKnown RBP2.67□□□□□ -1.98
VRK1-207ENST00000557352 TPGS2Q68CL5 300 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 SLC8B1Q6J4K2 584 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 C8orf74Q6P047 294 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 PODNL1Q6PEZ8 512 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 DCUN1D2Q6PH85 259 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 CLEC20AQ6ZU45 233 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 FAM183BPQ6ZVS7 135 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 CYP4V2Q6ZWL3 525 aaPredicted RBP2.67□□□□□ -1.98
VRK1-207ENST00000557352 PIWIL3Q7Z3Z3 882 aaKnown RBP2.67□□□□□ -1.98
VRK1-207ENST00000557352 ACOT1Q86TX2 421 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 SLC13A5Q86YT5 568 aaPredicted RBP2.67□□□□□ -1.98
VRK1-207ENST00000557352 KLHDC8AQ8IYD2 350 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 CEND1Q8N111 149 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 MREGQ8N565 214 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 C12orf29Q8N999 325 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 OR4F5Q8NH21 305 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 CCDC26Q8TAB7 109 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 PHOSPHO2Q8TCD6 241 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 SPPL2BQ8TCT7 592 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 SLC2A14Q8TDB8 520 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 RNF138Q8WVD3 245 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 KRT35Q92764 455 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 SNRNP40Q96DI7 357 aaKnown RBP2.67□□□□□ -1.98
VRK1-207ENST00000557352 PCED1BQ96HM7 432 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 MCEEQ96PE7 176 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 NPY6RQ99463 290 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 ZNF670Q9BS34 389 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 FUT8Q9BYC5 575 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 ZNF350Q9GZX5 532 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 WWP1Q9H0M0 922 aa2.67□□□□□ -1.98
VRK1-207ENST00000557352 RAB17Q9H0T7 212 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms