RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 CD8AP01732 235 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 IGHV4-39P01824 125 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 OPN1LWP04000 364 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 FAM157CP0CG43 387 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 SDC1P18827 310 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 ATP6V1C1P21283 382 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 SFTPDP35247 375 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 ACVR1BP36896 505 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 CCT5P48643 541 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 ATP12AP54707 1039 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 ZNF117Q03924 483 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 BSPH1Q075Z2 132 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 FOXF1Q12946 379 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 SELENBP1Q13228 472 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 PDK3Q15120 406 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 PPA1Q15181 289 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 CD226Q15762 336 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 KCNMB1Q16558 191 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 TMEM176BQ3YBM2 270 aaPredicted RBP7.66□□□□□ -1.18
VRK1-206ENST00000557222 ZNF385BQ569K4 471 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 AGAP6Q5VW22 663 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 CDC73Q6P1J9 531 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 Q6ZSR9 355 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 GATSQ8NAP1 163 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 OR10H5Q8NGA6 315 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 FBXO27Q8NI29 283 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 PSMA8Q8TAA3 256 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 PHOSPHO1Q8TCT1 267 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 GPR119Q8TDV5 335 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 ZFP90Q8TF47 636 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 MZB1Q8WU39 189 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 OIT3Q8WWZ8 545 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 CIDECQ96AQ7 238 aaPredicted RBP7.66□□□□□ -1.18
VRK1-206ENST00000557222 ACTRT3Q9BYD9 372 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 SRXN1Q9BYN0 137 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 TMEM185BQ9H7F4 350 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 COQ10BQ9H8M1 238 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 PPCSQ9HAB8 311 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 YAE1D1Q9NRH1 226 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 OXSMQ9NWU1 459 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 ATP6V1HQ9UI12 483 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 CDC42EP3Q9UKI2 254 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 EMCNQ9ULC0 261 aa7.66□□□□□ -1.18
VRK1-206ENST00000557222 NUP214P35658 2090 aaPredicted RBP7.66□□□□□ -1.18
VRK1-206ENST00000557222 TMEM114B3SHH9 223 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 SHISA9B4DS77 424 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 NPIPB9F8W1W9 429 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 GTPBP1O00178 669 aaKnown RBP7.65□□□□□ -1.18
VRK1-206ENST00000557222 AZIN1O14977 448 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 PLIN3O60664 434 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 CYTIPO60759 359 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 DNAJA2O60884 412 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 URI1O94763 535 aaPredicted RBP7.65□□□□□ -1.18
VRK1-206ENST00000557222 CHEK2O96017 543 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 HMGN2P05204 90 aaKnown RBP7.65□□□□□ -1.18
VRK1-206ENST00000557222 FGF4P08620 206 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 PRKCAP17252 672 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 GGT1P19440 569 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 COX5AP20674 150 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 ENPP1P22413 925 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 FKBP2P26885 142 aaKnown RBP7.65□□□□□ -1.18
VRK1-206ENST00000557222 SHC1P29353 583 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 SLC7A1P30825 629 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 CRHR1P34998 444 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 CDKN1AP38936 164 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 LOXL1Q08397 574 aaPredicted RBP7.65□□□□□ -1.18
VRK1-206ENST00000557222 RASGEF1BQ0VAM2 473 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 LIPMQ5VYY2 423 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 GALNT5Q7Z7M9 940 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 PHC2Q8IXK0 858 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 NOA1Q8NC60 698 aaKnown RBP7.65□□□□□ -1.18
VRK1-206ENST00000557222 MAPK1IP1LQ8NDC0 245 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 KBTBD8Q8NFY9 601 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 OR56A1Q8NGH5 318 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 OR5W2Q8NH69 310 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 ADAMTS15Q8TE58 950 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 OR5P2Q8WZ92 322 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 MOAP1Q96BY2 351 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 FAM120BQ96EK7 910 aaKnown RBP7.65□□□□□ -1.18
VRK1-206ENST00000557222 C16orf58Q96GQ5 468 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 PSD2Q9BQI7 771 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 TNFRSF12AQ9NP84 129 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 SIRT3Q9NTG7 399 aaPredicted RBP7.65□□□□□ -1.18
VRK1-206ENST00000557222 ZCCHC3Q9NUD5 404 aaKnown RBP7.65□□□□□ -1.18
VRK1-206ENST00000557222 LPAR3Q9UBY5 353 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 MID2Q9UJV3 735 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 ING1Q9UK53 422 aaPredicted RBP7.65□□□□□ -1.18
VRK1-206ENST00000557222 B3GALT5Q9Y2C3 310 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 POLR3KQ9Y2Y1 108 aaPredicted RBP7.65□□□□□ -1.18
VRK1-206ENST00000557222 DTNAQ9Y4J8 743 aa7.65□□□□□ -1.18
VRK1-206ENST00000557222 IGKV3D-15A0A087WSY6 115 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 A0A096LNT2 108 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 ZNF503-AS2A6NEH8 195 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 OR5H1A6NKK0 313 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 LSM1O15116 133 aaKnown RBP7.64□□□□□ -1.19
VRK1-206ENST00000557222 ZNF264O43296 627 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 AKAP10O43572 662 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 LYPLA1O75608 230 aaPredicted RBP7.64□□□□□ -1.19
VRK1-206ENST00000557222 NUDT14O95848 222 aa7.64□□□□□ -1.19
VRK1-206ENST00000557222 AK1P00568 194 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms