RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 NIPBLQ6KC79 2804 aaeCLIP6.56□□□□□ -1.36
SCFD1-222ENST00000556768 MTORP42345 2549 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 NPIPA5A0A0B4J1W7 369 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 CCDC154A6NI56 674 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 NPIPA7E9PJI5 369 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 FCMRO60667 390 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 ADAM11O75078 769 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 SLC22A3O75751 556 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 AQP8O94778 261 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 PRKD3O94806 890 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 KRT75O95678 551 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 RAF1P04049 648 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 UBTFL6P0CB48 400 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-222ENST00000556768 NPIPA8P0DM63 369 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 OR12D1P0DN82 309 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 UQCRBP14927 111 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 IL11P20809 199 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 EPHA3P29320 983 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 NME5P56597 212 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 SELENBP1Q13228 472 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 CASP8Q14790 479 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 SPANXN4Q5MJ08 99 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 C3orf33Q6P1S2 294 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 TNFAIP8L2Q6P589 184 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-222ENST00000556768 CBLN3Q6UW01 205 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF563Q8TA94 476 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 PIWIL2Q8TC59 973 aaKnown RBP6.56□□□□□ -1.36
SCFD1-222ENST00000556768 GPR119Q8TDV5 335 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 ST8SIA1Q92185 356 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 NRGNQ92686 78 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 NEURL3Q96EH8 262 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 WFIKKN1Q96NZ8 548 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 ALPK1Q96QP1 1244 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 TACO1Q9BSH4 297 aaKnown RBP6.56□□□□□ -1.36
SCFD1-222ENST00000556768 HDHD5Q9BXW7 423 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 LAT2Q9GZY6 243 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 OR51I1Q9H343 314 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 WDR55Q9H6Y2 383 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-222ENST00000556768 RMND5AQ9H871 391 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 GP6Q9HCN6 339 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 KLHL28Q9NXS3 571 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 BTNL2Q9UIR0 455 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 ICAM5Q9UMF0 924 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 PLEKHA6Q9Y2H5 1048 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 KCNE3Q9Y6H6 103 aa6.56□□□□□ -1.36
SCFD1-222ENST00000556768 PHF3Q92576 2039 aaKnown RBP6.56□□□□□ -1.36
SCFD1-222ENST00000556768 A0A0J9YW62 118 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 GOLGA8QA0A0J9YX86 632 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 GOLGA8OA6NCC3 632 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 GOLGA8NF8WBI6 632 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 RFXANKO14593 260 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ANKRD28O15084 1053 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 SS18L1O75177 396 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 SNNO75324 88 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 GUSBP08236 651 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 NR2F1P10589 423 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 IL7RP16871 459 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 PRKCAP17252 672 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 PSMA4P25789 261 aaKnown RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 SLC6A8P48029 635 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 CASP9P55211 416 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 RAC3P60763 192 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 UFM1P61960 85 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 CSNK2A1P68400 391 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 FOXF1Q12946 379 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 QPRTQ15274 297 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF141Q15928 474 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 GSTA3Q16772 222 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 TIGD2Q4W5G0 525 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 BEND6Q5SZJ8 279 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF474Q6S9Z5 364 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 WFDC8Q8IUA0 241 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 CLEC4FQ8N1N0 589 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ZFP90Q8TF47 636 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 DYDC1Q8WWB3 177 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ROPN1LQ96C74 230 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ZHX1-C8orf76Q96EF9 292 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ARSGQ96EG1 525 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 CCDC115Q96NT0 180 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 TRNT1Q96Q11 434 aaKnown RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 THUMPD3Q9BV44 507 aaKnown RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ZNF350Q9GZX5 532 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 MTHFD2LQ9H903 347 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 NGBQ9NPG2 151 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 AIG1Q9NVV5 245 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 THUMPD1Q9NXG2 353 aaKnown RBP6.55□□□□□ -1.36
SCFD1-222ENST00000556768 KLHL9Q9P2J3 617 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 CLEC4AQ9UMR7 237 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 ITPR3Q14573 2671 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 NPIPB9F8W1W9 429 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 SDHDO14521 159 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 KLF11O14901 512 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 UBDO15205 165 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 DIAPH2O60879 1101 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 SCN2BO60939 215 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 UGT2B17O75795 530 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 CGAP01215 116 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 HRGP04196 525 aa6.55□□□□□ -1.36
SCFD1-222ENST00000556768 YES1P07947 543 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms