RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 MLC1Q15049 377 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 NDUFAF6Q330K2 333 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 TIGD2Q4W5G0 525 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 DCST2Q5T1A1 773 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.44□□□□□ -0.74
ACTN1-221ENST00000556571 CDC73Q6P1J9 531 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 ZYG11AQ6WRX3 759 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 TMPPEQ6ZT21 453 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 FRMD7Q6ZUT3 714 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 IL17RELQ6ZVW7 336 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 R3HCC1LQ7Z5L2 792 aaKnown RBP10.44□□□□□ -0.74
ACTN1-221ENST00000556571 MTDHQ86UE4 582 aaKnown RBP10.44□□□□□ -0.74
ACTN1-221ENST00000556571 MREGQ8N565 214 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 RFWD2Q8NHY2 731 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 ADAMTS15Q8TE58 950 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 ZNF524Q96C55 264 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 MSI2Q96DH6 328 aaKnown RBP10.44□□□□□ -0.74
ACTN1-221ENST00000556571 FCRL1Q96LA6 429 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 MUS81Q96NY9 551 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 TSSK3Q96PN8 268 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 PIMREGQ9BSJ6 248 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 ACTRT3Q9BYD9 372 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 SIRT3Q9NTG7 399 aaPredicted RBP10.44□□□□□ -0.74
ACTN1-221ENST00000556571 ASB6Q9NWX5 421 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 TAS2R16Q9NYV7 291 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 BAIAP2L1Q9UHR4 511 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 NOSIPQ9Y314 301 aaKnown RBP10.44□□□□□ -0.74
ACTN1-221ENST00000556571 ATP23Q9Y6H3 246 aa10.44□□□□□ -0.74
ACTN1-221ENST00000556571 A0A1W2PR80 420 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 NPIPB9F8W1W9 429 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 G3V2L1 256 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 GPR171O14626 319 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 LY6HO94772 140 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 PROCP04070 461 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 KRT16P08779 473 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 UBL4AP11441 157 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 APEHP13798 732 aaKnown RBP10.43□□□□□ -0.74
ACTN1-221ENST00000556571 NR4A2P43354 598 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 ASMTP46597 345 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 CCR4P51679 360 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 RUNX1T1Q06455 604 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 GABRA6Q16445 453 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 KRT71Q3SY84 523 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 ABLIM2Q6H8Q1 611 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 TMCO5AQ8N6Q1 288 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 ZNF614Q8N883 585 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 ST8SIA1Q92185 356 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 APOPT1Q96IL0 206 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 PRR14Q9BWN1 585 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 C1QTNF6Q9BXI9 259 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 EML4Q9HC35 981 aaKnown RBP10.43□□□□□ -0.74
ACTN1-221ENST00000556571 TNFRSF12AQ9NP84 129 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 MALT1Q9UDY8 824 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 LGALS13Q9UHV8 139 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 RAB21Q9UL25 225 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 FAF1Q9UNN5 650 aaPredicted RBP10.43□□□□□ -0.74
ACTN1-221ENST00000556571 TMED5Q9Y3A6 229 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 FKBP7Q9Y680 259 aa10.43□□□□□ -0.74
ACTN1-221ENST00000556571 HEATR1Q9H583 2144 aaKnown RBP10.42□□□□□ -0.74
ACTN1-221ENST00000556571 ZNF716A6NP11 495 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 RGS16O15492 202 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-221ENST00000556571 KIAA0513O60268 411 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 PLIN3O60664 434 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 DNAJA2O60884 412 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 MRPL33O75394 65 aaKnown RBP10.42□□□□□ -0.74
ACTN1-221ENST00000556571 TGFAP01135 160 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 NEFHP12036 1026 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 EFNA1P20827 205 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-221ENST00000556571 CCT3P49368 545 aaKnown RBP10.42□□□□□ -0.74
ACTN1-221ENST00000556571 SESN3P58005 492 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 DNAJB13P59910 316 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 PHC1P78364 1004 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 RFTN2Q52LD8 501 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-221ENST00000556571 SYT14P1Q58G82 188 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 C1QTNF12Q5T7M4 302 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 CLEC6AQ6EIG7 209 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 CROCCP2Q86T23 111 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 C17orf78Q8N4C9 275 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 RFLNBQ8N5W9 214 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 ZNF540Q8NDQ6 660 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 OR56A1Q8NGH5 318 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 CLHC1Q8NHS4 586 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 SLC25A43Q8WUT9 341 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-221ENST00000556571 TMEM234Q8WY98 164 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 ZHX1-C8orf76Q96EF9 292 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 TRMOQ9BU70 441 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 THUMPD3Q9BV44 507 aaKnown RBP10.42□□□□□ -0.74
ACTN1-221ENST00000556571 LAT2Q9GZY6 243 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 QRSL1Q9H0R6 528 aaKnown RBP10.42□□□□□ -0.74
ACTN1-221ENST00000556571 CENPHQ9H3R5 247 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 MYOZ1Q9NP98 299 aaPredicted RBP10.42□□□□□ -0.74
ACTN1-221ENST00000556571 EMCNQ9ULC0 261 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 PTGDR2Q9Y5Y4 395 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 KCNE3Q9Y6H6 103 aa10.42□□□□□ -0.74
ACTN1-221ENST00000556571 LOC390937A0A1W2PQ73 354 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 SERINC4A6NH21 518 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 TCF21O43680 179 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 MYZAPP0CAP1 466 aa10.41□□□□□ -0.74
ACTN1-221ENST00000556571 RPL3P39023 403 aaKnown RBP10.41□□□□□ -0.74
ACTN1-221ENST00000556571 SLC16A1P53985 500 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms