RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 GXYLT1Q4G148 440 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 FNDC7Q5VTL7 733 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 NUP210LQ5VU65 1888 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 PLBD1Q6P4A8 553 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 LINC00114Q6XXX2 140 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 MARCH3Q86UD3 253 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 SLITRK4Q8IW52 837 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 CLDN22Q8N7P3 220 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 C3orf49Q96BT1 292 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 CHCHD6Q9BRQ6 235 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 TGIF2Q9GZN2 237 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 HOXD1Q9GZZ0 328 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 EVA1AQ9H8M9 152 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 KHNYNO15037 678 aaKnown RBP16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 RCBTB2O95199 551 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 SYPP08247 313 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 ABCD3P28288 659 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 SLC9A3P48764 834 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 SKP2Q13309 424 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 AADACL4Q5VUY2 407 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 ANKRD37Q7Z713 158 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 IGFN1Q86VF2 1251 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 OR4F15Q8NGB8 312 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 OR5M3Q8NGP4 307 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 OMA1Q96E52 524 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 ZHX1-C8orf76Q96EF9 292 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 OPALINQ96PE5 141 aa16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 MRTO4Q9UKD2 239 aaKnown RBP16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 LSM2Q9Y333 95 aaKnown RBP16.78■□□□□ 0.28
SDR39U1-220ENST00000556548 D6RAR5 112 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 MYL12BO14950 172 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 ZNF264O43296 627 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 CLPXO76031 633 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 PPP1R3DO95685 299 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 HMGN1P05114 100 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 SP9P0CG40 484 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 BCAP31P51572 246 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 SPHARQ15513 63 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 ZSWIM7Q19AV6 140 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 FAM199XQ6PEV8 388 aaPredicted RBP16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 NANOGP1Q8N7R0 232 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 C8orf44Q96CB5 159 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 MND1Q9BWT6 205 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 TAPBPLQ9BX59 468 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 HCAR1Q9BXC0 346 aa16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 H2AFY2Q9P0M6 372 aaPredicted RBP16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 DIMT1Q9UNQ2 313 aaKnown RBP16.77■□□□□ 0.28
SDR39U1-220ENST00000556548 PNMA8CA0A1B0GUJ8 204 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 WWP2O00308 870 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 PTP4A3O75365 173 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 HBQ1P09105 142 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 OCM2P0CE71 109 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 OCMP0CE72 109 aaPredicted RBP16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 S100A1P23297 94 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 RBM34P42696 430 aaKnown RBP16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 DCAF7P61962 342 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 SSX1Q16384 188 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 KLHL22Q53GT1 634 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 OR2G6Q5TZ20 316 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 CXXC5Q7LFL8 322 aaKnown RBP16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 DNAJA3Q96EY1 480 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 DEPDC7Q96QD5 511 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 CENPOQ9BU64 300 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 MCCC2Q9HCC0 563 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 IGLV3-12A0A075B6K2 115 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 A0A087WUJ7 227 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 SNTNA6NMZ2 147 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 HCN1O60741 890 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 ALOX12BO75342 701 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 NADKO95544 446 aaPredicted RBP16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 CCL4P13236 92 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 ZNF28P17035 718 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 GPR143P51810 404 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 EMP2P54851 167 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 FOXK2Q01167 660 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 OVCH1Q7RTY7 1134 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 LHFPL3Q86UP9 236 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 FAM71CQ8NEG0 241 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 DNAJA4Q8WW22 397 aaPredicted RBP16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 METTL21AQ8WXB1 218 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 BCL7BQ9BQE9 202 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 NEURL2Q9BR09 285 aa16.76■□□□□ 0.27
SDR39U1-220ENST00000556548 HCRTR2O43614 444 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 TSPAN2O60636 221 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 MYL12AP19105 171 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 ATP6V1E1P36543 226 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 CD79BP40259 229 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 RNF4P78317 190 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 RAB40BQ12829 278 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 FHL1Q13642 323 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 KLHL12Q53G59 568 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 CCDC157Q569K6 752 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 ZNF385CQ66K41 422 aaPredicted RBP16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 POMZP3Q6PJE2 187 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 CYB561A3Q8NBI2 242 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 ZNF563Q8TA94 476 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 GATAD2BQ8WXI9 593 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 PMEPA1Q969W9 287 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 DCSTAMPQ9H295 470 aa16.75■□□□□ 0.27
SDR39U1-220ENST00000556548 ELOA3DA6NLF2 546 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms