RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 ATP5J2P56134 94 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 MPP2Q14168 576 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 CASP8Q14790 479 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 ADAM5Q6NVV9 412 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 Q6ZT83 130 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 KIRREL3Q8IZU9 778 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 ZNF563Q8TA94 476 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 ZNF75CPQ92670 426 aaPredicted RBP20.03■□□□□ 0.8
ACTN1-220ENST00000556433 ZBTB9Q96C00 473 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 ZG16BQ96DA0 208 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 POTEKPQ9BYX7 375 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 HAO1Q9UJM8 370 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 SLC35A3Q9Y2D2 325 aa20.03■□□□□ 0.8
ACTN1-220ENST00000556433 CSPG4Q6UVK1 2322 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 ZNF724A8MTY0 619 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 BCAS1O75363 584 aaPredicted RBP20.02■□□□□ 0.8
ACTN1-220ENST00000556433 LYZL6O75951 148 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 S100A3P33764 101 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 RYKP34925 604 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 APOBEC1P41238 236 aaKnown RBP20.02■□□□□ 0.8
ACTN1-220ENST00000556433 KHKP50053 298 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 NME5P56597 212 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 RPS4XP62701 263 aaKnown RBP20.02■□□□□ 0.8
ACTN1-220ENST00000556433 CSNK2A1P68400 391 aaPredicted RBP20.02■□□□□ 0.8
ACTN1-220ENST00000556433 DPY19L1Q2PZI1 675 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 GPAT3Q53EU6 434 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 SYT14P1Q58G82 188 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.02■□□□□ 0.8
ACTN1-220ENST00000556433 ZNF100Q8IYN0 542 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 LRRC34Q8IZ02 419 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 PIWIL2Q8TC59 973 aaKnown RBP20.02■□□□□ 0.8
ACTN1-220ENST00000556433 SLC25A43Q8WUT9 341 aaPredicted RBP20.02■□□□□ 0.8
ACTN1-220ENST00000556433 OIT3Q8WWZ8 545 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 NEURL3Q96EH8 262 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 PAIP2Q9BPZ3 127 aaKnown RBP20.02■□□□□ 0.8
ACTN1-220ENST00000556433 SLC35A5Q9BS91 424 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 SAP130Q9H0E3 1048 aa20.02■□□□□ 0.8
ACTN1-220ENST00000556433 MARCOQ9UEW3 520 aaPredicted RBP20.02■□□□□ 0.8
ACTN1-220ENST00000556433 FN1P02751 2386 aaKnown RBP20.02■□□□□ 0.8
ACTN1-220ENST00000556433 FESP07332 822 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 EDNRAP25101 427 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 FUT5Q11128 374 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 FAM174BQ3ZCQ3 159 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 CEP85LQ5SZL2 805 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 AP1ARQ63HQ0 302 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 FRRS1Q6ZNA5 592 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 GALNT5Q7Z7M9 940 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 HMGN2P46Q86SG4 172 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 ATG4DQ86TL0 474 aaPredicted RBP20.01■□□□□ 0.79
ACTN1-220ENST00000556433 MTDHQ86UE4 582 aaKnown RBP20.01■□□□□ 0.79
ACTN1-220ENST00000556433 FAM71CQ8NEG0 241 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 FBXW5Q969U6 566 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 MEAF6Q9HAF1 191 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 CTPS2Q9NRF8 586 aa20.01■□□□□ 0.79
ACTN1-220ENST00000556433 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.01■□□□□ 0.79
ACTN1-220ENST00000556433 SPIN1Q9Y657 262 aaPredicted RBP20.01■□□□□ 0.79
ACTN1-220ENST00000556433 DPRXA6NFQ7 191 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 E9PBE3 544 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 C1QCP02747 245 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 UFM1P61960 85 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 KCNJ10P78508 379 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 CHRNEQ04844 493 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 STK11Q15831 433 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 SMAP2Q8WU79 429 aaPredicted RBP20■□□□□ 0.79
ACTN1-220ENST00000556433 NEUROG1Q92886 237 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 TEX37Q96LM6 180 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 CCDC106Q9BWC9 280 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 CHRNA9Q9UGM1 479 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 BTNL2Q9UIR0 455 aa20■□□□□ 0.79
ACTN1-220ENST00000556433 NSD1Q96L73 2696 aaPredicted RBP19.99■□□□□ 0.79
ACTN1-220ENST00000556433 PRAMEF27A3QJZ7 478 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 PCSK6P29122 969 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 HPCAP84074 193 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 BSPH1Q075Z2 132 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 BST1Q10588 318 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 TNFAIP8L3Q5GJ75 292 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 OGFOD2Q6N063 350 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 GRINAQ7Z429 371 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 RNF130Q86XS8 419 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 ARFGAP2Q8N6H7 521 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 MUCL1Q96DR8 90 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 ZHX1-C8orf76Q96EF9 292 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 DNAJA3Q96EY1 480 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 CCDC115Q96NT0 180 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 EMC3Q9P0I2 261 aa19.99■□□□□ 0.79
ACTN1-220ENST00000556433 CADP27708 2225 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 CCDC154A6NI56 674 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 CLDN24A6NM45 220 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 HMGN4O00479 90 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 SOD3P08294 240 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 DANCRP0C864 163 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 CCNA2P20248 432 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 IGHV1-2P23083 117 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 IDH2P48735 452 aaKnown RBP19.98■□□□□ 0.79
ACTN1-220ENST00000556433 PDK3Q15120 406 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 PPA1Q15181 289 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 ZNF672Q499Z4 452 aaPredicted RBP19.98■□□□□ 0.79
ACTN1-220ENST00000556433 HHATQ5VTY9 493 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 ABLIM2Q6H8Q1 611 aa19.98■□□□□ 0.79
ACTN1-220ENST00000556433 SEZ6L2Q6UXD5 910 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms