RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 HOMER3Q9NSC5 361 aa2.56□□□□□ -2
EFCAB11-210ENST00000556078 SLC35D1Q9NTN3 355 aa2.56□□□□□ -2
EFCAB11-210ENST00000556078 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.56□□□□□ -2
EFCAB11-210ENST00000556078 SPHK1Q9NYA1 384 aa2.56□□□□□ -2
EFCAB11-210ENST00000556078 ZNF224Q9NZL3 707 aa2.56□□□□□ -2
EFCAB11-210ENST00000556078 C6orf203Q9P0P8 240 aaPredicted RBP2.56□□□□□ -2
EFCAB11-210ENST00000556078 FAM153AQ9UHL3 310 aa2.56□□□□□ -2
EFCAB11-210ENST00000556078 SMC3Q9UQE7 1217 aa2.56□□□□□ -2
EFCAB11-210ENST00000556078 HS3ST2Q9Y278 367 aa2.56□□□□□ -2
EFCAB11-210ENST00000556078 SH3GLB1Q9Y371 365 aa2.56□□□□□ -2
EFCAB11-210ENST00000556078 RRP15Q9Y3B9 282 aaKnown RBP2.56□□□□□ -2
EFCAB11-210ENST00000556078 FAM215AQ9Y5M1 114 aa2.56□□□□□ -2
EFCAB11-210ENST00000556078 WIF1Q9Y5W5 379 aa2.56□□□□□ -2
EFCAB11-210ENST00000556078 STYXL1Q9Y6J8 313 aa2.56□□□□□ -2
EFCAB11-210ENST00000556078 A0A087X0K7 114 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 A0A0D9SEW6 157 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 A0A0G2JNG1 304 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 TEX13DA0A0J9YY54 714 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 ZCWPW2A0A1B0GU75 182 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 A0A1W2PPK0 400 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 C2orf81A6NN90 581 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 YJEFN3A6XGL0 299 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 TMEM110-MUSTN1A8MSY1 372 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 E7ENQ6 273 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 NPIPA3F8WFD2 350 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 G3V4G9 280 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 EEF2KO00418 725 aaKnown RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 SLC22A2O15244 555 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 HCRTR1O43613 425 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 OR6A2O95222 327 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 BAG4O95429 457 aaKnown RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 AK1P00568 194 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 UGT2B4P06133 528 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 IGHV4-31P0DP07 118 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 KRT13P13646 458 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 LHCGRP22888 699 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 TRIM23P36406 574 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 NKX2-1P43699 371 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 PITPNBP48739 271 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 CNN1P51911 297 aaKnown RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 ATP5J2P56134 94 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 MYL6P60660 151 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 PITX1P78337 314 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 MAT1AQ00266 395 aaKnown RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 RELQ04864 619 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 KIF5AQ12840 1032 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 DPYSQ14117 519 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 KIR2DS5Q14953 304 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 OPCMLQ14982 345 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 ZRSR1Q15695 479 aaKnown RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 KYAT1Q16773 422 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 CCNYL2Q5T2Q4 361 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 C1orf189Q5VU69 101 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 AGAP6Q5VW22 663 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 MLIPQ5VWP3 458 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 PRAMEF7Q5VXH5 474 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 WBP2NLQ6ICG8 309 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 TMEM26Q6ZUK4 368 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 C16orf82Q7Z2V1 217 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 PIWIL4Q7Z3Z4 852 aaKnown RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 MED12LQ86YW9 2145 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 LAX1Q8IWV1 398 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 RFLNBQ8N5W9 214 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 KLHDC1Q8N7A1 406 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 PRR26Q8N8Z3 221 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 DCAF4L2Q8NA75 395 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 SLC24A4Q8NFF2 622 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 OR1J1Q8NGS3 322 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 OR13C3Q8NGS6 347 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 OR1L3Q8NH93 324 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 FGFBP3Q8TAT2 258 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 ESAMQ96AP7 390 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 TMEM186Q96B77 213 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 CCDC127Q96BQ5 260 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 ZNF274Q96GC6 653 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 SGK494Q96LW2 274 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 TSSK2Q96PF2 358 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 PRMT1Q99873 361 aaKnown RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 ALKBH7Q9BT30 221 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 TPPP3Q9BW30 176 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 GSDMCQ9BYG8 508 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 ULBP1Q9BZM6 244 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 TM6SF2Q9BZW4 377 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 CARD9Q9H257 536 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 DCLRE1BQ9H816 532 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 C10orf88Q9H8K7 445 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 COQ10BQ9H8M1 238 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 LRRC4Q9HBW1 653 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 APOBEC3GQ9HC16 384 aaKnown RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 EML4Q9HC35 981 aaKnown RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 PHPT1Q9NRX4 125 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 FAM207AQ9NSI2 230 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 ZNF701Q9NV72 531 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 SOHLH2Q9NX45 425 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 PDP1Q9P0J1 537 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 C19orf25Q9UFG5 118 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 DNPEPQ9ULA0 475 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 NAP1L2Q9ULW6 460 aaPredicted RBP2.55□□□□□ -2
EFCAB11-210ENST00000556078 STUB1Q9UNE7 303 aa2.55□□□□□ -2
EFCAB11-210ENST00000556078 FAF1Q9UNN5 650 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms