RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 WDR45Q9Y484 360 aa17.47■□□□□ 0.39
PRKCH-219ENST00000555906 SPIN1Q9Y657 262 aaPredicted RBP17.47■□□□□ 0.39
PRKCH-219ENST00000555906 LYZL6O75951 148 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 SOD3P08294 240 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 UQCRC2P22695 453 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 PPP2R2BQ00005 443 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 FUT5Q11128 374 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 MAPK14Q16539 360 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 KRT71Q3SY84 523 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 AP1ARQ63HQ0 302 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 DNAJC14Q6Y2X3 702 aaPredicted RBP17.46■□□□□ 0.39
PRKCH-219ENST00000555906 TMPPEQ6ZT21 453 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 GALNT5Q7Z7M9 940 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 ATG4DQ86TL0 474 aaPredicted RBP17.46■□□□□ 0.39
PRKCH-219ENST00000555906 ANKRD46Q86W74 232 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 VPS37AQ8NEZ2 397 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 SMAP2Q8WU79 429 aaPredicted RBP17.46■□□□□ 0.39
PRKCH-219ENST00000555906 ZNF75CPQ92670 426 aaPredicted RBP17.46■□□□□ 0.39
PRKCH-219ENST00000555906 TRMT61AQ96FX7 289 aaKnown RBP17.46■□□□□ 0.39
PRKCH-219ENST00000555906 TRIM2Q9C040 744 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 SAP130Q9H0E3 1048 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 HAO1Q9UJM8 370 aa17.46■□□□□ 0.39
PRKCH-219ENST00000555906 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.46■□□□□ 0.39
PRKCH-219ENST00000555906 MAGED1Q9Y5V3 778 aaPredicted RBP17.46■□□□□ 0.39
PRKCH-219ENST00000555906 CHD3Q12873 2000 aaKnown RBP17.45■□□□□ 0.38
PRKCH-219ENST00000555906 SONP18583 2426 aaKnown RBP17.45■□□□□ 0.38
PRKCH-219ENST00000555906 IGKV3D-15A0A087WSY6 115 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 PRSS51A0A1B0GVH4 220 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 INAFM1C9JVW0 142 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 SULT2B1O00204 365 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 ANKRD28O15084 1053 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 TM9SF1O15321 606 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 DHRS4L1P0CG22 281 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 OR12D1P0DN82 309 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 EDNRAP25101 427 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 APOBEC1P41238 236 aaKnown RBP17.45■□□□□ 0.38
PRKCH-219ENST00000555906 CLNS1AP54105 237 aaKnown RBP17.45■□□□□ 0.38
PRKCH-219ENST00000555906 TNK1Q13470 666 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 PDK3Q15120 406 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 PPA1Q15181 289 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 STK11Q15831 433 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 CLEC12BQ2HXU8 276 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 TIMM23BQ5SRD1 257 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 TNFAIP8L2Q6P589 184 aaPredicted RBP17.45■□□□□ 0.38
PRKCH-219ENST00000555906 FRRS1Q6ZNA5 592 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 PRIMA1Q86XR5 153 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 NEUROG1Q92886 237 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 ROPN1LQ96C74 230 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 NEURL3Q96EH8 262 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 SORT1Q99523 831 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 CCDC106Q9BWC9 280 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 EXOSC3Q9NQT5 275 aaKnown RBP17.45■□□□□ 0.38
PRKCH-219ENST00000555906 CHRNA9Q9UGM1 479 aa17.45■□□□□ 0.38
PRKCH-219ENST00000555906 A0A1W2PP18 115 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 WDR91A4D1P6 747 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 DPRXA6NFQ7 191 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 DNPH1O43598 174 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 BCAS1O75363 584 aaPredicted RBP17.44■□□□□ 0.38
PRKCH-219ENST00000555906 IGHV1-2P23083 117 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 RPL14P50914 215 aaKnown RBP17.44■□□□□ 0.38
PRKCH-219ENST00000555906 CASP9P55211 416 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 PHC1P78364 1004 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 HPCAP84074 193 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 VEZF1Q14119 521 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 CASP8Q14790 479 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 SPANXN4Q5MJ08 99 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 GRINAQ7Z429 371 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 MTDHQ86UE4 582 aaKnown RBP17.44■□□□□ 0.38
PRKCH-219ENST00000555906 P2RY8Q86VZ1 359 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 ZNF563Q8TA94 476 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 XAGE5Q8WWM1 108 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 RAB8BQ92930 207 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 GTPBP3Q969Y2 492 aaKnown RBP17.44■□□□□ 0.38
PRKCH-219ENST00000555906 ZHX1-C8orf76Q96EF9 292 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 C20orf27Q9GZN8 174 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 HDGFL3Q9Y3E1 203 aa17.44■□□□□ 0.38
PRKCH-219ENST00000555906 GOLGA8QA0A0J9YX86 632 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 GOLGA8OA6NCC3 632 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 E9PBE3 544 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 GOLGA8NF8WBI6 632 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 RGS16O15492 202 aaPredicted RBP17.43■□□□□ 0.38
PRKCH-219ENST00000555906 PGM3O95394 542 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 CPSF4O95639 269 aaKnown RBP17.43■□□□□ 0.38
PRKCH-219ENST00000555906 PMS2P2O95744 297 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 THBS1P07996 1170 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 GGT1P19440 569 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 FKBP2P26885 142 aaKnown RBP17.43■□□□□ 0.38
PRKCH-219ENST00000555906 SLC1A6P48664 564 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 PLAURQ03405 335 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 KRTAP1-1Q07627 177 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 PGGHGQ32M88 737 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 OGFOD2Q6N063 350 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.43■□□□□ 0.38
PRKCH-219ENST00000555906 ZNF100Q8IYN0 542 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 PIGXQ8TBF5 258 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 MUCL1Q96DR8 90 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 SLC35A5Q9BS91 424 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 CTPS2Q9NRF8 586 aa17.43■□□□□ 0.38
PRKCH-219ENST00000555906 MARCOQ9UEW3 520 aaPredicted RBP17.43■□□□□ 0.38
PRKCH-219ENST00000555906 OR5H1A6NKK0 313 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms