RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 IDH2P48735 452 aaKnown RBP12.27□□□□□ -0.45
SHMT2-219ENST00000555563 SORDQ00796 357 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 EPS8Q12929 822 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 SYT14P1Q58G82 188 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 FAM214BQ7L5A3 538 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 KIF18BQ86Y91 864 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 ZZZ3Q8IYH5 903 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 NFKBIDQ8NI38 313 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 BBS10Q8TAM1 723 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 TSPEARQ8WU66 669 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 ABHD3Q8WU67 409 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 SLC25A43Q8WUT9 341 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-219ENST00000555563 ROBO4Q8WZ75 1007 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 GMPPAQ96IJ6 420 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-219ENST00000555563 ZNF317Q96PQ6 595 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-219ENST00000555563 OR5B2Q96R09 309 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 ZNF559Q9BR84 538 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 OPN3Q9H1Y3 402 aaPredicted RBP12.27□□□□□ -0.45
SHMT2-219ENST00000555563 CACYBPQ9HB71 228 aaKnown RBP12.27□□□□□ -0.45
SHMT2-219ENST00000555563 MCCC2Q9HCC0 563 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 TIGARQ9NQ88 270 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 KLHL14Q9P2G3 628 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 CHRNA9Q9UGM1 479 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 CORO2BQ9UQ03 480 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 CHST2Q9Y4C5 530 aa12.27□□□□□ -0.45
SHMT2-219ENST00000555563 ADGRG4Q8IZF6 3080 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 CENPEQ02224 2701 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 C5orf58C9J3I9 102 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 FAAHO00519 579 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 FBP2O00757 339 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 PGM3O95394 542 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 CGAP01215 116 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 PABPC4LP0CB38 370 aaKnown RBP12.26□□□□□ -0.45
SHMT2-219ENST00000555563 GKN3PP0CG01 181 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 AGTR1P30556 359 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 APOBEC1P41238 236 aaKnown RBP12.26□□□□□ -0.45
SHMT2-219ENST00000555563 MTPNP58546 118 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 KRTAP10-9P60411 292 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 NFYCQ13952 458 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 SELPLGQ14242 412 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 LARS2Q15031 903 aaKnown RBP12.26□□□□□ -0.45
SHMT2-219ENST00000555563 RUNDC3AQ59EK9 446 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 ZNF474Q6S9Z5 364 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-219ENST00000555563 ZNF440Q8IYI8 595 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 CLIP4Q8N3C7 705 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 REXO5Q96IC2 774 aaKnown RBP12.26□□□□□ -0.45
SHMT2-219ENST00000555563 LURAP1Q96LR2 239 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 ANKRD27Q96NW4 1050 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 CGREF1Q99674 301 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 SPATA9Q9BWV2 254 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 TMEM38AQ9H6F2 299 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 SAR1AQ9NR31 198 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 SERINC1Q9NRX5 453 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 PROCRQ9UNN8 238 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 EMC9Q9Y3B6 208 aa12.26□□□□□ -0.45
SHMT2-219ENST00000555563 SPIN1Q9Y657 262 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-219ENST00000555563 LRBAP50851 2863 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 IGHV3-15A0A0B4J1V0 119 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 TUBAL3A6NHL2 446 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 EVPLLA8MZ36 301 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 TFPIP10646 304 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 CD8BP10966 210 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 UQCRBP14927 111 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 KLK2P20151 261 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 CCNA2P20248 432 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 ENPP1P22413 925 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 TACR3P29371 465 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 POLR2HP52434 150 aaKnown RBP12.25□□□□□ -0.45
SHMT2-219ENST00000555563 CTBP2P56545 445 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 RAC3P60763 192 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 CDK6Q00534 326 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 KLF10Q13118 480 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 CAPRIN1Q14444 709 aaKnown RBP12.25□□□□□ -0.45
SHMT2-219ENST00000555563 ADRM1Q16186 407 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 ZNF311Q5JNZ3 666 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 FCRLAQ7L513 359 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 TMEM200AQ86VY9 491 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 OR6K3Q8NGY3 331 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 FAM222BQ8WU58 562 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 C10orf82Q8WW14 230 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 OR11A1Q9GZK7 315 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 GLRX2Q9NS18 164 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 MRGBPQ9NV56 204 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 KLHL13Q9P2N7 655 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 OSGIN1Q9UJX0 560 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 IFT52Q9Y366 437 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 FBN2P35556 2912 aa12.25□□□□□ -0.45
SHMT2-219ENST00000555563 TMED7-TICAM2A0A0A6YYA0 188 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 SMAD9O15198 467 aaKnown RBP12.24□□□□□ -0.45
SHMT2-219ENST00000555563 FRS3O43559 492 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 FESP07332 822 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 PRG2P13727 222 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 ETS2P15036 469 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 AQP1P29972 269 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 CCKARP32238 428 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 ACAA2P42765 397 aaKnown RBP12.24□□□□□ -0.45
SHMT2-219ENST00000555563 SLC1A3P43003 542 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 HTR3AP46098 478 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 DIO1P49895 249 aa12.24□□□□□ -0.45
SHMT2-219ENST00000555563 SCARB2Q14108 478 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms