RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 MRPS18CQ9Y3D5 142 aaKnown RBP9.9□□□□□ -0.82
SHMT2-218ENST00000555213 ENPP4Q9Y6X5 453 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 NINQ8N4C6 2090 aa9.9□□□□□ -0.82
SHMT2-218ENST00000555213 HELZ2Q9BYK8 2649 aaKnown RBP9.9□□□□□ -0.82
SHMT2-218ENST00000555213 CFAP46Q8IYW2 2715 aa9.9□□□□□ -0.83
SHMT2-218ENST00000555213 LINC01387J3KSC0 135 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 SYT5O00445 386 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 AQP7O14520 342 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 ADAM10O14672 748 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 BCKDKO14874 412 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 SLC19A2O60779 497 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 DEAF1O75398 565 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-218ENST00000555213 ZNF17P17021 662 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 PGCP20142 388 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 PRKACGP22612 351 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 PTGS2P35354 604 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 EIF1P41567 113 aaKnown RBP9.89□□□□□ -0.83
SHMT2-218ENST00000555213 ZNF136P52737 540 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 KCNC4Q03721 635 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 SKP2Q13309 424 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 GLYR1Q49A26 553 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-218ENST00000555213 WIPI1Q5MNZ9 446 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-218ENST00000555213 MRPL2Q5T653 305 aaKnown RBP9.89□□□□□ -0.83
SHMT2-218ENST00000555213 ZNF836Q6ZNA1 936 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 ZBTB49Q6ZSB9 765 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 YRDCQ86U90 279 aaKnown RBP9.89□□□□□ -0.83
SHMT2-218ENST00000555213 GALNT4Q8N4A0 578 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 CBR4Q8N4T8 237 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 ICA1LQ8NDH6 482 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 FAM71CQ8NEG0 241 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 OR6T1Q8NGN1 323 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 OR5W2Q8NH69 310 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 RASSF5Q8WWW0 418 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 GEMIN6Q8WXD5 167 aaKnown RBP9.89□□□□□ -0.83
SHMT2-218ENST00000555213 TMEM234Q8WY98 164 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 LZICQ8WZA0 190 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 DHRS1Q96LJ7 313 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 PLSCR2Q9NRY7 297 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 KLHL28Q9NXS3 571 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 ICAM5Q9UMF0 924 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 A4GNTQ9UNA3 340 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 LIPGQ9Y5X9 500 aa9.89□□□□□ -0.83
SHMT2-218ENST00000555213 A0A1B0GTH9 108 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 A0A1B0GVC2 190 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 CDHR4A6H8M9 788 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 C17orf51A8MQB3 221 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 H0YJX3 145 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 J3QKU1 62 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 M0R3H8 397 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 PRRG2O14669 202 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 FRS3O43559 492 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 ADAM11O75078 769 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 ACTL6AO96019 429 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 THY1P04216 161 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 PRG2P13727 222 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 PLA2G2AP14555 144 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 RHCEP18577 417 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 TCEA1P23193 301 aaKnown RBP9.88□□□□□ -0.83
SHMT2-218ENST00000555213 AQP4P55087 323 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 HSF1Q00613 529 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 IGFBP7Q16270 282 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 NDUFAF6Q330K2 333 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 NHSL2Q5HYW2 709 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 WLSQ5T9L3 541 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 CBLN3Q6UW01 205 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 IZUMO2Q6UXV1 221 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 ZNF550Q7Z398 422 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 CYP4Z1Q86W10 505 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 OR5K1Q8NHB7 308 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 ZNF563Q8TA94 476 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 SLC35B4Q969S0 331 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 EME1Q96AY2 570 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 ARSGQ96EG1 525 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 ZNF347Q96SE7 839 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 OSBPL10Q9BXB5 764 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 EVA1AQ9H8M9 152 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 SMURF2Q9HAU4 748 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 MED17Q9NVC6 651 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 DNAJB12Q9NXW2 375 aaKnown RBP9.88□□□□□ -0.83
SHMT2-218ENST00000555213 VDAC3Q9Y277 283 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 RPH3AQ9Y2J0 694 aaPredicted RBP9.88□□□□□ -0.83
SHMT2-218ENST00000555213 HRH3Q9Y5N1 445 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 LYVE1Q9Y5Y7 322 aa9.88□□□□□ -0.83
SHMT2-218ENST00000555213 MAST4O15021 2626 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 KALRNO60229 2985 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 BOD1L1Q8NFC6 3051 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 RP1L1Q8IWN7 2480 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-218ENST00000555213 FIGNL2A6NMB9 653 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 CYSRT1A8MQ03 144 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 E9PQ18 207 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 G3V2T6 193 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 LYPD3O95274 346 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 ALPLP05186 524 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 TPOP07202 933 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 LINGO3P0C6S8 592 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 POU3F2P20265 443 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-218ENST00000555213 GNLYP22749 145 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 CHMP24386 653 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 ELK4P28324 431 aa9.87□□□□□ -0.83
SHMT2-218ENST00000555213 RRM2P31350 389 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms