RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CDKN2DP55273 166 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 PIN1Q13526 163 aaPredicted RBP6.47□□□□□ -1.37
SYNE2-216ENST00000555002 OR5I1Q13606 314 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 CLINT1Q14677 625 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 ZBED3Q96IU2 234 aaPredicted RBP6.47□□□□□ -1.37
SYNE2-216ENST00000555002 SEZ6LQ9BYH1 1024 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 SDK2Q58EX2 2172 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 A6NIN4 97 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 M0R3H8 397 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 CDK2AP1O14519 115 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 OR2J3O76001 311 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 ACPPP15309 386 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 ZNF684Q5T5D7 378 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 NKAIN2Q5VXU1 208 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 FAM111BQ6SJ93 734 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 CTRCQ99895 268 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 SYT17Q9BSW7 474 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 CCM2LQ9NUG4 571 aaPredicted RBP6.47□□□□□ -1.37
SYNE2-216ENST00000555002 PURGQ9UJV8 347 aaKnown RBP6.47□□□□□ -1.37
SYNE2-216ENST00000555002 UBR1Q8IWV7 1749 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 KDM4EB2RXH2 506 aaPredicted RBP6.47□□□□□ -1.37
SYNE2-216ENST00000555002 KRBOX1C9JBD0 128 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 NFKBIEO00221 500 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 ETFAP13804 333 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 POU4F3Q15319 338 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 CTC1Q2NKJ3 1217 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 ADOQ96SZ5 270 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 EGLN1Q9GZT9 426 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 EGLN3Q9H6Z9 239 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 TNFRSF19Q9NS68 423 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 CACNG2Q9Y698 323 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 V9GYS6 101 aa6.47□□□□□ -1.37
SYNE2-216ENST00000555002 MROH2AA6NES4 1674 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 C17orf112F2Z3M2 114 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 GRPP07492 148 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 SSR4P51571 173 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 PHYHD1Q5SRE7 291 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 ESPNLQ6ZVH7 1005 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 CHTF18Q8WVB6 975 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 IGSF21Q96ID5 467 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 IL23AQ9NPF7 189 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 ANKMY1Q9P2S6 941 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 CACNA1EQ15878 2313 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 A0A0J9YY10 115 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 H3BMQ9 156 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 DENRO43583 198 aaKnown RBP6.46□□□□□ -1.37
SYNE2-216ENST00000555002 PRAMEF4O60810 478 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 FBXO24O75426 580 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 RPS5P46782 204 aaKnown RBP6.46□□□□□ -1.37
SYNE2-216ENST00000555002 MOGQ16653 247 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 MPEG1Q2M385 716 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 ASB11Q8WXH4 323 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 TIMM29Q9BSF4 260 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 MAF1Q9H063 256 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 PTPRUQ92729 1446 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 NWD2Q9ULI1 1742 aa6.46□□□□□ -1.37
SYNE2-216ENST00000555002 PIRO00625 290 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 LDB3O75112 727 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 HLA-AP01891 365 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 AHSGP02765 367 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 CD1CP29017 333 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 HOXA11P31270 313 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 OPCMLQ14982 345 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 MLF2Q15773 248 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 TMEM41BQ5BJD5 291 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 NDUFAF5Q5TEU4 345 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 PM20D2Q8IYS1 436 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 CDS1Q92903 461 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 ARRDC3Q96B67 414 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 RNF170Q96K19 258 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 LMF2Q9BU23 707 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 RPS10-NUDT3A0A1W2PQS6 291 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 SOCS5O75159 536 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 C5AR1P21730 350 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 RPS10P46783 165 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 EXOSC2Q13868 293 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 EBPQ15125 230 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 UBE2NLQ5JXB2 153 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 CTSL3PQ5NE16 218 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 VWA5B2Q8N398 1253 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 ATF6BQ99941 703 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 MMP27Q9H306 513 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 NLKQ9UBE8 527 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 NPTNQ9Y639 398 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 NCOR1O75376 2440 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 ARFGEF3Q5TH69 2177 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 MBD5Q9P267 1494 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 A0A1W2PPH5 198 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 NUPL2O15504 423 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 EFSO43281 561 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 NCR1O76036 304 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 LYPLA2O95372 231 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 SMIM17P0DL12 118 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 RAB13P51153 203 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 CRMP1Q14194 572 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 DCAF12Q5T6F0 453 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 PIP5KL1Q5T9C9 394 aa6.46□□□□□ -1.38
SYNE2-216ENST00000555002 CHDHQ8NE62 594 aaPredicted RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 DCLRE1CQ96SD1 692 aaKnown RBP6.46□□□□□ -1.38
SYNE2-216ENST00000555002 FAM159BA6NKW6 160 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms