RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TSTA3Q13630 321 aaPredicted RBP14.53□□□□□ -0.08
SYNE3-203ENST00000554873 KLHL26Q53HC5 615 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 C9orf152Q5JTZ5 239 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 ASTLQ6HA08 431 aaPredicted RBP14.53□□□□□ -0.08
SYNE3-203ENST00000554873 FAM71E1Q6IPT2 247 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 GDPD4Q6W3E5 623 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 GAREM2Q75VX8 874 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 MISPQ8IVT2 679 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 SMAP2Q8WU79 429 aaPredicted RBP14.53□□□□□ -0.08
SYNE3-203ENST00000554873 AUTS2Q8WXX7 1259 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 MYLIPQ8WY64 445 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 UTP23Q9BRU9 249 aaKnown RBP14.53□□□□□ -0.08
SYNE3-203ENST00000554873 RSPO3Q9BXY4 272 aaPredicted RBP14.53□□□□□ -0.08
SYNE3-203ENST00000554873 LINC00597Q9H2U6 94 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 PLEKHA1Q9HB21 404 aa14.53□□□□□ -0.08
SYNE3-203ENST00000554873 METTL1Q9UBP6 276 aaKnown RBP14.53□□□□□ -0.08
SYNE3-203ENST00000554873 SLC5A10A0PJK1 596 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 TXNL1O43396 289 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 SERPIND1P05546 499 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 KLK1P06870 262 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 SAGP10523 405 aaPredicted RBP14.52□□□□□ -0.08
SYNE3-203ENST00000554873 SFTPCP11686 197 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 ZNF35P13682 527 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 NPPBP16860 134 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 GABRR2P28476 465 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 POLR2LP62875 67 aaKnown RBP14.52□□□□□ -0.08
SYNE3-203ENST00000554873 RAB33AQ14088 237 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 SLBPQ14493 270 aaKnown RBP eCLIP14.52□□□□□ -0.08
SYNE3-203ENST00000554873 RNF113BQ8IZP6 322 aaKnown RBP14.52□□□□□ -0.08
SYNE3-203ENST00000554873 MMP21Q8N119 569 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 OR5M1Q8NGP8 315 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 ZNF480Q8WV37 535 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 TCF7L1Q9HCS4 588 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 MRPL17Q9NRX2 175 aaKnown RBP14.52□□□□□ -0.08
SYNE3-203ENST00000554873 TREM2Q9NZC2 230 aa14.52□□□□□ -0.08
SYNE3-203ENST00000554873 UBE2QL1A1L167 161 aa14.52□□□□□ -0.09
SYNE3-203ENST00000554873 POM121BA6NF01 834 aa14.52□□□□□ -0.09
SYNE3-203ENST00000554873 NRG2O14511 850 aaPredicted RBP14.52□□□□□ -0.09
SYNE3-203ENST00000554873 IGHA1P01876 353 aa14.52□□□□□ -0.09
SYNE3-203ENST00000554873 SOD2P04179 222 aa14.52□□□□□ -0.09
SYNE3-203ENST00000554873 CTSAP10619 480 aa14.52□□□□□ -0.09
SYNE3-203ENST00000554873 ACHEP22303 614 aa14.52□□□□□ -0.09
SYNE3-203ENST00000554873 NPBWR1P48145 328 aa14.52□□□□□ -0.09
SYNE3-203ENST00000554873 MECP2P51608 486 aaKnown RBP14.52□□□□□ -0.09
SYNE3-203ENST00000554873 RIDAP52758 137 aaKnown RBP14.52□□□□□ -0.09
SYNE3-203ENST00000554873 MEF2AQ02078 507 aaPredicted RBP14.52□□□□□ -0.09
SYNE3-203ENST00000554873 CDNFQ49AH0 187 aa14.52□□□□□ -0.09
SYNE3-203ENST00000554873 RPS26P11Q5JNZ5 115 aaPredicted RBP14.52□□□□□ -0.09
SYNE3-203ENST00000554873 OR7E24Q6IFN5 339 aa14.52□□□□□ -0.09
SYNE3-203ENST00000554873 RFKQ969G6 155 aa14.52□□□□□ -0.09
SYNE3-203ENST00000554873 GPBP1L1Q9HC44 474 aaPredicted RBP14.52□□□□□ -0.09
SYNE3-203ENST00000554873 OR10H1Q9Y4A9 318 aa14.52□□□□□ -0.09
SYNE3-203ENST00000554873 A0A1B0GV90 55 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 LRIT2A6NDA9 550 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 FOXE1O00358 373 aaPredicted RBP14.51□□□□□ -0.09
SYNE3-203ENST00000554873 KHDRBS3O75525 346 aaKnown RBP14.51□□□□□ -0.09
SYNE3-203ENST00000554873 CD63P08962 238 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 MUC1P15941 1255 aaPredicted RBP14.51□□□□□ -0.09
SYNE3-203ENST00000554873 MMP11P24347 488 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 CSF2RBP32927 897 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 SREBF2Q12772 1141 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 C18orf63Q68DL7 685 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 C3orf33Q6P1S2 294 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 APOOLQ6UXV4 268 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 BOLLQ8N9W6 283 aaKnown RBP14.51□□□□□ -0.09
SYNE3-203ENST00000554873 SMG9Q9H0W8 520 aaKnown RBP14.51□□□□□ -0.09
SYNE3-203ENST00000554873 MVB12BQ9H7P6 319 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 DMRT3Q9NQL9 472 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 PCDHB10Q9UN67 800 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 NPFFR2Q9Y5X5 522 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 GJA1P17302 382 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 HTR2AP28223 471 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 PBLDP30039 288 aaPredicted RBP14.51□□□□□ -0.09
SYNE3-203ENST00000554873 TBPL1P62380 186 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 PPIAP62937 165 aaKnown RBP14.51□□□□□ -0.09
SYNE3-203ENST00000554873 PRR5P85299 388 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 OC90Q02509 493 aaPredicted RBP14.51□□□□□ -0.09
SYNE3-203ENST00000554873 PEA15Q15121 130 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 FAM27D1Q5T7N8 215 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 HENMT1Q5T8I9 393 aaKnown RBP14.51□□□□□ -0.09
SYNE3-203ENST00000554873 REEP3Q6NUK4 255 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 CDC73Q6P1J9 531 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 TECPR1Q7Z6L1 1165 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 FAM83CQ9BQN1 747 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 FAM117AQ9C073 453 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 SLC6A16Q9GZN6 736 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 MYNNQ9NPC7 610 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 ABRACLQ9P1F3 81 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 EXOGQ9Y2C4 368 aaKnown RBP14.51□□□□□ -0.09
SYNE3-203ENST00000554873 A0A1B0GWJ7 208 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 COLCA2A8K830 154 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 IMPA2O14732 288 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 CLN5O75503 358 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 AKR1C2P52895 323 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 ART1P52961 327 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 RPS26P62854 115 aaKnown RBP14.51□□□□□ -0.09
SYNE3-203ENST00000554873 AKR1C1Q04828 323 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 FABP9Q0Z7S8 132 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 FZD5Q13467 585 aa14.51□□□□□ -0.09
SYNE3-203ENST00000554873 IL10RAQ13651 578 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms