RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 UBCP0CG48 685 aaKnown RBP13.06□□□□□ -0.32
VTI1B-204ENST00000554659 HOXC13P31276 330 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 RPS27AP62979 156 aaKnown RBP13.06□□□□□ -0.32
VTI1B-204ENST00000554659 UBA52P62987 128 aaKnown RBP13.06□□□□□ -0.32
VTI1B-204ENST00000554659 LEXMQ3ZCV2 418 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 SYT6Q5T7P8 510 aaPredicted RBP13.06□□□□□ -0.32
VTI1B-204ENST00000554659 HBMQ6B0K9 141 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 LINC00299Q6ZSB3 139 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF100Q8IYN0 542 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 RNF175Q8N4F7 328 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 OR1S1Q8NH92 325 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 CPT1CQ8TCG5 803 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 ZBTB8AQ96BR9 441 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 ZBED3Q96IU2 234 aaPredicted RBP13.06□□□□□ -0.32
VTI1B-204ENST00000554659 CASD1Q96PB1 797 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 ST6GALNAC5Q9BVH7 336 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 SAMD10Q9BYL1 202 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 SMIM3Q9BZL3 60 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 PCDHGA6Q9Y5G7 932 aa13.06□□□□□ -0.32
VTI1B-204ENST00000554659 STMND1H3BQB6 276 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 RDH16O75452 317 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 SCGB2A1O75556 95 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 PTHP01270 115 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 PDE7AQ13946 482 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 ENTHD1Q8IYW4 607 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF679Q8IYX0 411 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 IL17RCQ8NAC3 791 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 SLC2A12Q8TD20 617 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 SLAMF9Q96A28 289 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 ARL5BQ96KC2 179 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 TIMM29Q9BSF4 260 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 RBFOX1Q9NWB1 397 aaKnown RBP13.05□□□□□ -0.32
VTI1B-204ENST00000554659 KCMF1Q9P0J7 381 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 A3GALT2U3KPV4 340 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 BLACEA4D250 179 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 HBQ1P09105 142 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 HOXD9P28356 352 aaPredicted RBP13.05□□□□□ -0.32
VTI1B-204ENST00000554659 ILKQ13418 452 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 HYAL4Q2M3T9 481 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 C17orf99Q6UX52 265 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 MEX3BQ6ZN04 569 aaKnown RBP13.05□□□□□ -0.32
VTI1B-204ENST00000554659 CMTM1Q8IZ96 169 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 PGBD5Q8N414 524 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 OR52R1Q8NGF1 315 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 FNDC9Q8TBE3 224 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 SDSLQ96GA7 329 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 EGLN3Q9H6Z9 239 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 TP53TG5Q9Y2B4 290 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 MAN2B1O00754 1011 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 KCNK5O95279 499 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 GYPBP06028 91 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 ARSAP15289 507 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 IL13RA1P78552 427 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 RAB31Q13636 194 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 LAX1Q8IWV1 398 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 SLC39A11Q8N1S5 342 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 OR5D14Q8NGL3 314 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 KIAA1143Q96AT1 154 aaPredicted RBP13.05□□□□□ -0.32
VTI1B-204ENST00000554659 CXXC1Q9P0U4 656 aaPredicted RBP13.05□□□□□ -0.32
VTI1B-204ENST00000554659 DIMT1Q9UNQ2 313 aaKnown RBP13.05□□□□□ -0.32
VTI1B-204ENST00000554659 RCE1Q9Y256 329 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 RPS10-NUDT3A0A1W2PQS6 291 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 A0A1W2PS29 197 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 POM121CA8CG34 1229 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 SERPINE2P07093 398 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 SLC1A3P43003 542 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 RPS10P46783 165 aaKnown RBP13.05□□□□□ -0.32
VTI1B-204ENST00000554659 FUNDC1Q8IVP5 155 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 FAM71F1Q96KD3 344 aaPredicted RBP13.05□□□□□ -0.32
VTI1B-204ENST00000554659 TSPAN10Q9H1Z9 355 aaPredicted RBP13.05□□□□□ -0.32
VTI1B-204ENST00000554659 HRH4Q9H3N8 390 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 TXNL4BQ9NX01 149 aaKnown RBP13.05□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF281Q9Y2X9 895 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 RHBDD3Q9Y3P4 386 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 UBR2Q8IWV8 1755 aa13.05□□□□□ -0.32
VTI1B-204ENST00000554659 C17orf113A0A1B0GUU1 675 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 DVL2O14641 736 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 LCMT2O60294 686 aaKnown RBP13.04□□□□□ -0.32
VTI1B-204ENST00000554659 FZD7O75084 574 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 CPMP14384 443 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 ETV6P41212 452 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 CX3CR1P49238 355 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 ADARB1P78563 741 aaKnown RBP13.04□□□□□ -0.32
VTI1B-204ENST00000554659 SLC39A5Q6ZMH5 540 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 GPR155Q7Z3F1 870 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 GLB1L2Q8IW92 636 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 GIMAP1Q8WWP7 306 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 ASB17Q8WXJ9 295 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 SGK494L7N484 410 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 HTR3AP46098 478 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 LTBQ06643 244 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 PEA15Q15121 130 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 WBP2NLQ6ICG8 309 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 TEX19Q8NA77 164 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 PSD2Q9BQI7 771 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 HAO2Q9NYQ3 351 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 TSPAN11A1L157 253 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 PEX14O75381 377 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 P04436 131 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms