RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PTDSS1P48651 473 aaKnown RBP11.72□□□□□ -0.53
SHMT2-211ENST00000554310 PCYT1AP49585 367 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 CCNIQ14094 377 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 QPRTQ15274 297 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 GUSBP1Q15486 140 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 TOMM34Q15785 309 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-211ENST00000554310 MAPK14Q16539 360 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 MMEL1Q495T6 779 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 COQ5Q5HYK3 327 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 HBMQ6B0K9 141 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 LRRC74BQ6ZQY2 392 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 LUZP2Q86TE4 346 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 FUNDC1Q8IVP5 155 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 CMIPQ8IY22 773 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 ANKFN1Q8N957 763 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 CNEP1R1Q8N9A8 125 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 FAM222BQ8WU58 562 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 VPS33AQ96AX1 596 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 CDRT15Q96T59 188 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 RBM24Q9BX46 236 aaKnown RBP11.72□□□□□ -0.53
SHMT2-211ENST00000554310 PRRG4Q9BZD6 226 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 TPT1P8Q9HAU6 139 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 S100A14Q9HCY8 104 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 EXOSC3Q9NQT5 275 aaKnown RBP11.72□□□□□ -0.53
SHMT2-211ENST00000554310 SLC6A13Q9NSD5 602 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 THUMPD1Q9NXG2 353 aaKnown RBP11.72□□□□□ -0.53
SHMT2-211ENST00000554310 GALNT8Q9NY28 637 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 CRIM1Q9NZV1 1036 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 CCDC167Q9P0B6 97 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 P2RX2Q9UBL9 471 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 NDUFAF1Q9Y375 327 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 OTOGQ6ZRI0 2925 aa11.72□□□□□ -0.53
SHMT2-211ENST00000554310 A0A0J9YW62 118 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 TUBAL3A6NHL2 446 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 AGAP5A6NIR3 686 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 A8MXE2 369 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 TNFSF11O14788 317 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 MRASO14807 208 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 CXCL13O43927 109 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 CYP7B1O75881 506 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 AQP8O94778 261 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 SYNGR4O95473 234 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 CHRM4P08173 479 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 PABPC4LP0CB38 370 aaKnown RBP11.71□□□□□ -0.53
SHMT2-211ENST00000554310 NR2F1P10589 423 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 CD8BP10966 210 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 ANPEPP15144 967 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 PGCP20142 388 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 IL11P20809 199 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 MVDP53602 400 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 PSME3P61289 254 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 CHRNEQ04844 493 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 GNA13Q14344 377 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 COX20Q5RI15 118 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 PPP4R4Q6NUP7 873 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 C3orf33Q6P1S2 294 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 C8orf82Q6P1X6 216 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-211ENST00000554310 VWA1Q6PCB0 445 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 TMEM200AQ86VY9 491 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 ZZZ3Q8IYH5 903 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 PCYOX1LQ8NBM8 494 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 TMEM234Q8WY98 164 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 GTF2H4Q92759 462 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 CPNE4Q96A23 557 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-211ENST00000554310 STARD4Q96DR4 205 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 GMPPAQ96IJ6 420 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-211ENST00000554310 THUMPD3Q9BV44 507 aaKnown RBP11.71□□□□□ -0.53
SHMT2-211ENST00000554310 SLC38A1Q9H2H9 487 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 TIGARQ9NQ88 270 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 GLRX2Q9NS18 164 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-211ENST00000554310 CALML5Q9NZT1 146 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 EMC9Q9Y3B6 208 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 LRRC42Q9Y546 428 aa11.71□□□□□ -0.53
SHMT2-211ENST00000554310 ABCA4P78363 2273 aa11.71□□□□□ -0.54
SHMT2-211ENST00000554310 AKAP6Q13023 2319 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 DSPPQ9NZW4 1301 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 A0A096LPI6 279 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 SS18L1O75177 396 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 SMNDC1O75940 238 aaKnown RBP eCLIP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 PLGP00747 810 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 OPN1LWP04000 364 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 DBIP07108 87 aaKnown RBP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 RPS4Y1P22090 263 aaKnown RBP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 SLC7A1P30825 629 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 SFTPDP35247 375 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 CRATP43155 626 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 KIR2DL2P43627 348 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 SLC6A8P48029 635 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 CRISP3P54108 245 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 KRTAP10-9P60411 292 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 DSTNP60981 165 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 SIRPAP78324 504 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 SNTB1Q13884 538 aaKnown RBP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 CEACAM7Q14002 265 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 SYPL1Q16563 259 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 ZNF239Q16600 458 aaKnown RBP11.7□□□□□ -0.54
SHMT2-211ENST00000554310 GTDC1Q4AE62 458 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 SLC2A7Q6PXP3 512 aa11.7□□□□□ -0.54
SHMT2-211ENST00000554310 BLOC1S3Q6QNY0 202 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms