RNA–Protein interactions for RNA: ENST00000554244.5

RAD51B-219, Transcript of RAD51 paralog B, human

TSL 3

Gene RAD51B, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-219	ENST00000554244	GLYR1	Q49A26	553 aa	Predicted RBP	5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	PDZK1	Q5T2W1	519 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	DDI2	Q5TDH0	399 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	VASN	Q6EMK4	673 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	PLBD1	Q6P4A8	553 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	ARHGAP11A	Q6P4F7	1023 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	SMARCD3	Q6STE5	483 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	IGF2-AS	Q6U949	168 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	CCBE1	Q6UXH8	406 aa	Predicted RBP	5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	GDPD3	Q7L5L3	318 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	SYT13	Q7L8C5	426 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	ZNF550	Q7Z398	422 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	LHFPL3	Q86UP9	236 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	CD163	Q86VB7	1156 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	MARCH9	Q86YJ5	346 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	CMIP	Q8IY22	773 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	ACBD7	Q8N6N7	88 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	ARIH2OS	Q8N7S6	290 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	TMEM99	Q8N816	258 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	ZFP41	Q8N8Y5	198 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	SYT14	Q8NB59	555 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	OR51G2	Q8NGK0	314 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	SLC2A12	Q8TD20	617 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	DNAJA4	Q8WW22	397 aa	Predicted RBP	5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	CNOT9	Q92600	299 aa	Known RBP	5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	BPIFA2	Q96DR5	249 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	C1GALT1C1	Q96EU7	318 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	VSTM2L	Q96N03	204 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	ZNF578	Q96N58	590 aa	Predicted RBP	5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	FRMD6	Q96NE9	622 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	LRFN5	Q96NI6	719 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	DGAT2	Q96PD7	388 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	SECISBP2	Q96T21	854 aa	Known RBP	5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	PELO	Q9BRX2	385 aa	Known RBP	5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	KATNB1	Q9BVA0	655 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	GPR174	Q9BXC1	333 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	C12orf49	Q9H741	205 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	ABCB9	Q9NP78	766 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	MEPE	Q9NQ76	525 aa	Predicted RBP	5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	SLC2A4RG	Q9NR83	387 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	PRTFDC1	Q9NRG1	225 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	STARD5	Q9NSY2	213 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	C20orf141	Q9NUB4	165 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	FLRT3	Q9NZU0	649 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	HCN3	Q9P1Z3	774 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	NDRG2	Q9UN36	371 aa	Known RBP	5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	SLC35A3	Q9Y2D2	325 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	GRIP1	Q9Y3R0	1128 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	PCDHGB2	Q9Y5G2	931 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	MTCH2	Q9Y6C9	303 aa		5.43	□□□□□ -1.54
RAD51B-219	ENST00000554244	ALPK2	Q86TB3	2170 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	SDK1	Q7Z5N4	2213 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244		A0A1W2PQL4	384 aa	Predicted RBP	5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244		A0A1W2PR77	199 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	TLCD2	A6NGC4	264 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	SLC22A31	A6NKX4	558 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	RIIAD1	A6NNX1	92 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	EFCAB7	A8K855	629 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	C12orf71	A8MTZ7	269 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	C1QTNF9B	B2RNN3	333 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	GTPBP1	O00178	669 aa	Known RBP	5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	CASK	O14936	926 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	POLR1C	O15160	346 aa	Predicted RBP	5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	LRRTM2	O43300	516 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	SEC14L5	O43304	696 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	RNF13	O43567	381 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	ADAM11	O75078	769 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	ZNF217	O75362	1048 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	PTP4A3	O75365	173 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	PPP1R3D	O95685	299 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	CSF2	P04141	144 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	HLA-DPB1	P04440	258 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	CTSB	P07858	339 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	NGFR	P08138	427 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	SAG	P10523	405 aa	Predicted RBP	5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	CHRNB1	P11230	501 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	SRF	P11831	508 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	IL7	P13232	177 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	NME1	P15531	152 aa	Known RBP	5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	HK1	P19367	917 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	PAICS	P22234	425 aa	Known RBP	5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	CFL1	P23528	166 aa	Known RBP	5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	AZGP1	P25311	298 aa	Known RBP	5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	PTBP1	P26599	531 aa	Known RBP eCLIP	5.42	□□□□□ -1.54	2e-6	■■■■■ 29.2
RAD51B-219	ENST00000554244	SSTR4	P31391	388 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	SLC6A6	P31641	620 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	GALNS	P34059	522 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	ATP6V1E1	P36543	226 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	CAPZA2	P47755	286 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	TGM4	P49221	684 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	MTNR1B	P49286	362 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	FNTB	P49356	437 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	GPR143	P51810	404 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	ATP12A	P54707	1039 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	TPTE	P56180	551 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	TAS2R43	P59537	309 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	ACTC1	P68032	377 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	ACTA1	P68133	377 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	C19orf57	Q0VDD7	668 aa		5.42	□□□□□ -1.54
RAD51B-219	ENST00000554244	FUT7	Q11130	342 aa		5.42	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms