RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ZKSCAN8Q15776 578 aaPredicted RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 EXOC3L2Q2M3D2 409 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 SPANXN3Q5MJ09 141 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TCHHL1Q5QJ38 904 aaPredicted RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 NCMAPQ5T1S8 102 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 GRHL2Q6ISB3 625 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PODNL1Q6PEZ8 512 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PLEKHM3Q6ZWE6 761 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 GSTA5Q7RTV2 222 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 ZBTB46Q86UZ6 589 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 GPR180Q86V85 440 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PLCZ1Q86YW0 608 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 LMNTD2Q8IXW0 634 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PM20D2Q8IYS1 436 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 UBQLNLQ8IYU4 475 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 CENPLQ8N0S6 344 aaPredicted RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF619Q8N2I2 560 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 ZCCHC7Q8N3Z6 543 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 RNF10Q8N5U6 811 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF611Q8N823 705 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 CNEP1R1Q8N9A8 125 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 SNX31Q8N9S9 440 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 FBXO36Q8NEA4 188 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 OR52B6Q8NGF0 335 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 OR52R1Q8NGF1 315 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 ROBO4Q8WZ75 1007 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 KAT2AQ92830 837 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 EXT2Q93063 718 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TMBIM1Q969X1 311 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 EFHD2Q96C19 240 aaPredicted RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TM4SF18Q96CE8 201 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 NXNL1Q96CM4 212 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TRMT61AQ96FX7 289 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 VPS39Q96JC1 886 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 FAR2Q96K12 515 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 ART5Q96L15 291 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 FAM111AQ96PZ2 611 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 FAM167BQ9BTA0 163 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TBCDQ9BTW9 1192 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TRAF4Q9BUZ4 470 aaPredicted RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TM2D2Q9BX73 214 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 OSBPL11Q9BXB4 747 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PINK1Q9BXM7 581 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 SRXN1Q9BYN0 137 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TSGA10Q9BZW7 698 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TRIM2Q9C040 744 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 KLHL4Q9C0H6 718 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 DERL2Q9GZP9 239 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 NUAK2Q9H093 628 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 DDX47Q9H0S4 455 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PIGMQ9H3S5 423 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 ZMAT3Q9HA38 289 aaKnown RBP2.77□□□□□ -1.97
SLIRP-202ENST00000553981 LZTFL1Q9NQ48 299 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 PLSCR4Q9NRQ2 329 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TMEM45AQ9NWC5 275 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 TAS2R10Q9NYW0 307 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 CTNNAL1Q9UBT7 734 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 LIPT1Q9Y234 373 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 SPACA6W5XKT8 324 aa2.77□□□□□ -1.97
SLIRP-202ENST00000553981 ARFGEF3Q5TH69 2177 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 A0A0J9YW62 118 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 A0A1W2PR80 420 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 GXYLT2A0PJZ3 443 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 OR6C76A6NM76 312 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 A8MV72 311 aaPredicted RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 E7EQL1 145 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 E7ESA3 106 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 H3BML4 177 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 C16orf97H3BN30 126 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 CASKO14936 926 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 CLGNO14967 610 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 SEC14L5O43304 696 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 EMC8O43402 210 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 RRP9O43818 475 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 SCO2O43819 266 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 SSX4O60224 188 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 GMFGO60234 142 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ERAL1O75616 437 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 STK16O75716 305 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF189O75820 626 aaPredicted RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 CBR3O75828 277 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 NDUFB8O95169 186 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 VENTXO95231 258 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 PTMAP06454 111 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TPM3P06753 285 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 KLK1P06870 262 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 RHOXF2BP0C7M4 288 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 FAM157CP0CG43 387 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 CCDC166P0CW27 439 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 PF4V1P10720 104 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TSPAN8P19075 237 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 NT5EP21589 574 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TBXA2RP21731 343 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 DPP4P27487 766 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 HNMTP50135 292 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 XKP51811 444 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 SARNPP82979 210 aaKnown RBP2.76□□□□□ -1.97
SLIRP-202ENST00000553981 PLIN5Q00G26 463 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 RUNX1T1Q06455 604 aa2.76□□□□□ -1.97
SLIRP-202ENST00000553981 TRAF3Q13114 568 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms