RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 SHOX2O60902 331 aaPredicted RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 BCAS1O75363 584 aaPredicted RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 MFN2O95140 757 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 SYNGR4O95473 234 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 IFNA14P01570 189 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 TMIGD3P0DMS9 266 aaPredicted RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 PEX19P40855 299 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 IDH2P48735 452 aaKnown RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 MNAT1P51948 309 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 POLR2HP52434 150 aaKnown RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 RAC3P60763 192 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 PLAURQ03405 335 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 MERTKQ12866 999 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 SELPLGQ14242 412 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 VMACQ2NL98 169 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 CTU2Q2VPK5 515 aaKnown RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 TMEM176BQ3YBM2 270 aaPredicted RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 RABL3Q5HYI8 236 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 HBMQ6B0K9 141 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 TMPPEQ6ZT21 453 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 NCCRP1Q6ZVX7 275 aaPredicted RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 CCDC80Q76M96 950 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 HMGN2P46Q86SG4 172 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 ADGRG3Q86Y34 549 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 TREML1Q86YW5 311 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 CCDC71Q8IV32 467 aaPredicted RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 ZZZ3Q8IYH5 903 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 CLIP4Q8N3C7 705 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 POU5F2Q8N7G0 328 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 LSMEM1Q8N8F7 131 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 C9orf106Q8NAJ2 232 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 OR10D3Q8NH80 312 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 SMPDL3BQ92485 455 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 OSTF1Q92882 214 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 CPNE4Q96A23 557 aaPredicted RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 ZNF524Q96C55 264 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 RCN3Q96D15 328 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 ZNF583Q96ND8 569 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 NPAS1Q99742 590 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 KLHDC3Q9BQ90 382 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 GPATCH1Q9BRR8 931 aaKnown RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 PIGMQ9H3S5 423 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 C12orf10Q9HB07 376 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 SLC24A3Q9HC58 644 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 GP6Q9HCN6 339 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 RLIMQ9NVW2 624 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 CHRNA9Q9UGM1 479 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 FOXD3Q9UJU5 478 aaPredicted RBP8.39□□□□□ -1.07
CHD8-206ENST00000553870 SLC13A4Q9UKG4 626 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 TRAPPC4Q9Y296 219 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 HDGFL3Q9Y3E1 203 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 MED12Q93074 2177 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 HEATR5AQ86XA9 2040 aa8.39□□□□□ -1.07
CHD8-206ENST00000553870 ICE1Q9Y2F5 2266 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 PRSS44E7EML9 344 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 H0YC42 278 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 ADAM11O75078 769 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 TGM6O95932 706 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 LGI1O95970 557 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 IL11P20809 199 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 TACR3P29371 465 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 SLC7A1P30825 629 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 SFTPDP35247 375 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 EIF1AXP47813 144 aaKnown RBP8.38□□□□□ -1.07
CHD8-206ENST00000553870 KCNJ5P48544 419 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 PCYT1AP49585 367 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 ZNF136P52737 540 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 TPD52P55327 224 aaPredicted RBP8.38□□□□□ -1.07
CHD8-206ENST00000553870 CSNK2A1P68400 391 aaPredicted RBP8.38□□□□□ -1.07
CHD8-206ENST00000553870 PON3Q15166 354 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 FBXL19-AS1Q494R0 122 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 SP5Q6BEB4 398 aaPredicted RBP8.38□□□□□ -1.07
CHD8-206ENST00000553870 C8orf82Q6P1X6 216 aaPredicted RBP8.38□□□□□ -1.07
CHD8-206ENST00000553870 POMZP3Q6PJE2 187 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 SLC15A3Q8IY34 581 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 SLC43A2Q8N370 569 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 DNAJA4Q8WW22 397 aaPredicted RBP8.38□□□□□ -1.07
CHD8-206ENST00000553870 FIG4Q92562 907 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 DDIT4LQ96D03 193 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 ZNF845Q96IR2 970 aaPredicted RBP8.38□□□□□ -1.07
CHD8-206ENST00000553870 SPOCK3Q9BQ16 436 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 ZNF559Q9BR84 538 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 SLC39A3Q9BRY0 314 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 POTEKPQ9BYX7 375 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 PRRG4Q9BZD6 226 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 TRIM2Q9C040 744 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 ENKD1Q9H0I2 346 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 RNF122Q9H9V4 155 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 CTPS2Q9NRF8 586 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 NDE1Q9NXR1 346 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 JKAMPQ9P055 326 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 OSGIN1Q9UJX0 560 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 ARHGAP21Q5T5U3 1957 aa8.38□□□□□ -1.07
CHD8-206ENST00000553870 USP9YO00507 2555 aaPredicted RBP8.38□□□□□ -1.07
CHD8-206ENST00000553870 TMED7-TICAM2A0A0A6YYA0 188 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 ELOVL7A1L3X0 281 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 A1L4Q6 167 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 FAM220BPB1ANY3 271 aa8.37□□□□□ -1.07
CHD8-206ENST00000553870 KDM4EB2RXH2 506 aaPredicted RBP8.37□□□□□ -1.07
CHD8-206ENST00000553870 AP3D1O14617 1153 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms