RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 KERAO60938 352 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 SULT1C4O75897 302 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 DEXIO95424 95 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 CPNE6O95741 557 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 WDPCPO95876 746 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 DHFRP00374 187 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 NR3C1P04150 777 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 LIPFP07098 398 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 CCDC130P13994 396 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 NCF2P19878 526 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 ANXA7P20073 488 aaKnown RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 PDHA2P29803 388 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 NUP62P37198 522 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 RABIFP47224 123 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 OR3A3P47888 321 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 SLC7A2P52569 658 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 CDH6P55285 790 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 OR1D5P58170 312 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 DCDC1P59894 354 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 RBP5P82980 135 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 CDK16Q00536 496 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 PMP22Q01453 160 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 CKAP4Q07065 602 aaKnown RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 FADDQ13158 208 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 ZMYND11Q15326 602 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 CHRNA6Q15825 494 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 DNAL1Q4LDG9 190 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 ANKRD20A4Q4UJ75 823 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 AGAP7PQ5VUJ5 663 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 NKAIN2Q5VXU1 208 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 RBMS3Q6XE24 437 aaKnown RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 PAQR9Q6ZVX9 377 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 C1orf186Q6ZWK4 172 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 PIGWQ7Z7B1 504 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 SCD5Q86SK9 330 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 SYCE1Q8N0S2 351 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 TAGAPQ8N103 731 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 C1orf52Q8N6N3 182 aaKnown RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 HJURPQ8NCD3 748 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 ST6GALNAC3Q8NDV1 305 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 TCP10LQ8TDR4 215 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 MARC2Q969Z3 335 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 TMEM80Q96HE8 168 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 MAGED4Q96JG8 741 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 NSMCE2Q96MF7 247 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 GFI1Q99684 422 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 CHCHD6Q9BRQ6 235 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 FAM213AQ9BRX8 229 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 CNPY3Q9BT09 278 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 ZSCAN5AQ9BUG6 496 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 NUDT9Q9BW91 350 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 FRMD8P1Q9BZ68 369 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 BCL2L14Q9BZR8 327 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 CNOT10Q9H9A5 744 aaKnown RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 CAB39LQ9H9S4 337 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 UFSP2Q9NUQ7 469 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 EXD2Q9NVH0 621 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 NSMCE4AQ9NXX6 385 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 PKD2L2Q9NZM6 624 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 TMEM9Q9P0T7 183 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 STX18Q9P2W9 335 aaKnown RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 ITGA11Q9UKX5 1188 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 ACOT9Q9Y305 439 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 UTP11Q9Y3A2 253 aaKnown RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 TMEM184BQ9Y519 407 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-218ENST00000553309 ATP8B3O60423 1300 aa4.34□□□□□ -1.71
ATXN3-218ENST00000553309 NOTCH1P46531 2555 aa4.34□□□□□ -1.72
ATXN3-218ENST00000553309 MXRA5Q9NR99 2828 aa4.34□□□□□ -1.72
ATXN3-218ENST00000553309 TMEM120BA0PK00 339 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 A8MU76 341 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 FAM25AB3EWG3 89 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 FAM25CB3EWG5 89 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 FAM25GB3EWG6 89 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 B4E171 279 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 J3QR06 171 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 RNF103O00237 685 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 O00370 1275 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 KPNA3O00505 521 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-218ENST00000553309 AIM2O14862 343 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 ANGPT2O15123 496 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 SLC22A2O15244 555 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 B4GAT1O43505 415 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 GMDSO60547 372 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 BCAS1O75363 584 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-218ENST00000553309 CCNKO75909 580 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 DCTN3O75935 186 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 OR7A10O76100 309 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 GCNT3O95395 438 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 PIGRP01833 764 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 KRT8P05787 483 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 PLEKP08567 350 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-218ENST00000553309 PRSS56P0CW18 603 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 ERVK-10P10266 1014 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 CCNB1P14635 433 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 ETS2P15036 469 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 ZNF18P17022 549 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 TCP1P17987 556 aaKnown RBP4.33□□□□□ -1.72
ATXN3-218ENST00000553309 GALP22466 123 aa4.33□□□□□ -1.72
ATXN3-218ENST00000553309 PTBP1P26599 531 aaKnown RBP eCLIP4.33□□□□□ -1.724e-18■■■■■ 40.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms